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pmid:27054165

Comprehensive RNA dataset of AGO2 associated RNAs in Jurkat cells following miR-21 over-expression.

Claudia Carissimi · Teresa Colombo · Gianluca Azzalin · Emanuela Cipolletta · Ilaria Laudadio · Giuseppe Macino · Valerio Fulci

Data in brief · 2016 doi:10.1016/j.dib.2016.02.041

Paper

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Experiment

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Comprehensive RNA dataset of AGO2 associated RNAs in Jurkat cells following miR-21 over-expression.
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10.1016/j.dib.2016.02.041
pmid
27054165
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Claudia Carissimi
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Teresa Colombo
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Gianluca Azzalin
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Emanuela Cipolletta
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Ilaria Laudadio
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Giuseppe Macino
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Valerio Fulci
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Data in brief
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2016
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We set out to identify miR-21 targets in Jurkat cells using a high-throughput biochemical approach (10.1016/j.biochi.2014.09.021[1]). Using a specific monoclonal antibody raised against AGO2, RISC complexes were immunopurified in Jurkat cells over-expressing miR-21 following lentiviral trasduction as well as in Jurkat control cells lines. A parallel immunoprecipitation using isotype-matched rat IgG was performed as a control. AGO2 associated mRNAs were profiled by microarray (GEO: GSE37212). AGO2 bound miRNAs were profiled by RNA-seq.
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