Data from salivary gland proteome analysis of female Aedes aegypti Linn.

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Proteomic data was analysed using two search algorithms SEQUEST and Mascot, which results in acquisition of 83,836 spectra which were assigned to 5417 peptides belonging to 1208 proteins.These proteins were then assigned molecular functions and further analysis revealed biological processes they are involved in using Gene Ontology annotations. Several immunity related pathways were found to be enriched in salivary gland.The data of this study are also related to the research article \"Mosquito-Borne Diseases and Omics: Salivary gland proteome of the female Aedes aegypti mosquito\" (Dhawan et al., 2017) [1]. These data are deposited in ProteomeXchange in the public dataset PXD002468. In addition,a scientific interpretation of this dataset by Dhawan et al. [1] is available at http://dx.doi.org/10.1089/journal.omi.2016.0160.", "claims": [{"id": "claim-data-access", "statement": "Data accessibilityData are available here and via a web application (ProteomeXchange) Consortium (http://proteomecentral.proteomexchange.org) via the PRIDE partner repository with the dataset identifier PXD002468.", "kind": "methodological", "target": null, "evidence": [{"asset": "source:pmid:28649586", "locator": "sections[1] \"p\" paragraph 1", "quote": "Data accessibilityData are available here and via a web application (ProteomeXchange) Consortium (http://proteomecentral.proteomexchange.org) via the PRIDE partner repository with the dataset identifier PXD002468."}], "state": "complete"}, {"id": "claim-target-result", "statement": "Using SEQUEST and Mascot with a 1% false discovery rate, the study assigned 83,836 spectra to 5,417 peptides belonging to 1,208 proteins; the source data are deposited in ProteomeXchange under PXD002468.", "kind": "quantitative", "target": {"value": 1.0, "unit": "per cent", "tolerance": null, "source": "A false discovery rate (FDR) of 1% was applied while identifying the peptide-spectrum matches (PSMs)."}, "evidence": [{"asset": "source:pmid:28649586", "locator": "sections[0] \"Abstract\" paragraph 1", "quote": "Proteomic data was analysed using two search algorithms SEQUEST and Mascot, which results in acquisition of 83,836 spectra which were assigned to 5417 peptides belonging to 1208 proteins."}, {"asset": "source:pmid:28649586", "locator": "sections[8] \"Data analysis\" paragraph 2", "quote": "A false discovery rate (FDR) of 1% was applied while identifying the peptide-spectrum matches (PSMs)."}, {"asset": "source:pmid:28649586", "locator": "sections[0] \"Abstract\" paragraph 1", "quote": "These data are deposited in ProteomeXchange in the public dataset PXD002468."}], "state": "complete"}], "gaps": []}, "experiment": {"state": "complete", "objective": "Using SEQUEST and Mascot with a 1% false discovery rate, the study assigned 83,836 spectra to 5,417 peptides belonging to 1,208 proteins; the source data are deposited in ProteomeXchange under PXD002468.", "steps": [{"id": "read_published_estimate", "order": 1, "name": "Read the published estimate from the source", "kind": "other", "state": "complete", "blocked_on": null, "description": "The claim, method and evidence span published with the source article.", "duration_hours": null, "parameters": {}, "inputs": ["source:pmid:28649586"], "outputs": ["the published estimate and its evidence"], "instruments": [], "reagents": []}, {"id": "obtain_source_data", "order": 2, "name": "Obtain the source data from the named repository", "kind": "data-preparation", "state": "complete", "blocked_on": null, "description": "The GEO series accession resolves and its sample accessions are listed. 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