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pmid:28669950
[Screening of biomarkers related with leukocyte responses early after burn injury in mice by differential gene expression profiling].
Qiong Zou · Yan-Bin Gao · Hui Jin · Zhi-Yang Lu · Peng-Wei Shi · Lei Yang
Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2017
Paper
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Experiment
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Data
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Analysis
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Complete file
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T test, fold changes and GO functional enrichment analysis were used to identify the differentially expressed genes (DEGs) related to leukocyte responses to burns; the interacting genes were transferred to STRING to construct the protein-protein interaction (PPI) network. Biological annotation of the sub-networks was executed using the software Cytoscape. Real-time PCR and Western blotting were used to verify the DEGs in mice.\nRESULTS: In mice at 1 day post-burn, a total of 658 genes were up-regulated and 1167 were down-regulated. PPI network and module analysis suggested that some of the genes (Stat1, Cdk1, Cd19, Lck and Jun) may play critical roles in the PPI network post-burn. Real-time PCR and Western blotting results in mice were consistent with those of bioinformatic analysis of Stat1, Cdk1 and Jun.\nCONCLUSION: Stat1, Cdk1 and Jun might be critical players in the development of leukocyte response in mice early after burn injury. 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