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pmid:30094954

Proteome Profiles of Head Kidney and Spleen of Rainbow Trout (Oncorhynchus Mykiss).

Gokhlesh Kumar · Karin Hummel · Ebrahim Razzazi-Fazeli · Mansour El-Matbouli

Proteomics · 2018 doi:10.1002/pmic.201800101

Paper

complete

Experiment

complete

Data

partial

Analysis

absent

Execution

absent

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Proteome Profiles of Head Kidney and Spleen of Rainbow Trout (Oncorhynchus Mykiss).
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10.1002/pmic.201800101
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30094954
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Gokhlesh Kumar
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Karin Hummel
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Ebrahim Razzazi-Fazeli
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Mansour El-Matbouli
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2018
abstract
The head kidney and spleen are major lymphoid organs of the teleost fish. The authors identify proteome profiles of head kidney and spleen of rainbow trout (Oncorhynchus mykiss) using a shotgun proteomic approach. Gene ontology annotation of proteins is predicted using bioinformatic tools. This study represents detailed proteome profiles of head kidney and spleen of rainbow trout, with a total of 3241 and 2542 proteins identified, respectively. It is found that lymphoid organs are equipped with a variety of functional proteins related to defense, receptor, signal transduction, antioxidant, cytoskeleton, transport, binding, and metabolic processes. The identified proteome profiles will serve as a template for understanding lymphoid organ functions in salmonids and will increase the amount of spectra information of rainbow trout proteins in the public data repository PRIDE. This data can be accessed via ProteomeXchange with identifiers PXD008473 and PXD008478.
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Complete file
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