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pmid:31078528
Adaptation of Human iPSC-Derived Cardiomyocytes to Tyrosine Kinase Inhibitors Reduces Acute Cardiotoxicity via Metabolic Reprogramming.
Huan Wang · Robert P Sheehan · Adam C Palmer · Robert A Everley · Sarah A Boswell · Noga Ron-Harel · Alison E Ringel · Kristina M Holton · Connor A Jacobson · Alison R Erickson · Laura Maliszewski · Marcia C Haigis · Peter K Sorger
Cell systems · 2019 doi:10.1016/j.cels.2019.03.009
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Experiment
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Data
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Analysis
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Execution
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Complete file
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To determine whether these change", "of the six datasets, as well our TKI-treated RNA-seq dataset, were used in a PCA analysis. Each d"], "order_basis": "paper_text_order:583", "id": "assay:1"}, {"role": "data_generation", "definition_id": "mass_spectrometry", "definition_version": "99e1195c7d6f", "definition_digest": null, "required_operations": [], "support_state": "partial", "source_hashes": {"assay_lexicon": "99e1195c7d6f"}, "confidence": 0.99, "evidence": ["onal assays, microscopy, RNA sequencing, and mass spectrometry (GEO: GSE114686; PRIDE: PXD012043). TKIs hav", "atinib for 72 hr. This change is detected in proteomic but not RNA-Seq data, implying post-transcri", "portant component of sarcomeres, ~80-fold in proteomic data as compared to control cells (Fig. 5C)", "eigenvalue decomposition method. 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When we performed immunofluorescence with antibodies against one of these protein"], "order_basis": "paper_text_order:1763", "id": "assay:3"}, {"role": "data_generation", "definition_id": "animal_model", "definition_version": "99e1195c7d6f", "definition_digest": null, "required_operations": [], "support_state": "partial", "source_hashes": {"assay_lexicon": "99e1195c7d6f"}, "confidence": 0.882, "evidence": ["immortalized H9c2 rat myocardial cells, and mouse embryonic fibroblasts (Will et al., 2008; Zh", "espiration in tumor cells, immortalized H9c2 rat myocardial cells, and mouse embryonic fibrob"], "order_basis": "paper_text_order:2885", "id": "assay:4"}, {"role": "analysis", "definition_id": "principal_component_analysis", "definition_version": "f2132e96ae6c7a4e", "definition_digest": null, "required_operations": ["pca_fit"], "support_state": "supported", "source_hashes": {"dsl_catalogue": "f2132e96ae6c7a4e"}, "confidence": 0.8, "evidence": ["PCA"], "order_basis": "consumes_earlier_output", "id": "assay:5"}]}