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pmid:32098132
A High Resolution Mass Spectrometry Study Reveals the Potential of Disulfide Formation in Human Mitochondrial Voltage-Dependent Anion Selective Channel Isoforms (hVDACs).
Maria G G Pittalà · Rosaria Saletti · Simona Reina · Vincenzo Cunsolo · Vito De Pinto · Salvatore Foti
International journal of molecular sciences · 2020 doi:10.3390/ijms21041468
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Complete file
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They are involved in complex interactions that regulate organelle and cellular metabolism. We have recently reported the post-translational modifications (PTMs) of the three VDAC isoforms purified from rat liver mitochondria (rVDACs), showing, for the first time, the over-oxidation of the cysteine residues as an exclusive feature of VDACs. Noteworthy, this peculiar PTM is not detectable in other integral membrane mitochondrial proteins, as defined by their elution at low salt concentration by a hydroxyapatite column. In this study, the association of tryptic and chymotryptic proteolysis with UHPLC/High Resolution nESI-MS/MS, allowed for us to extend the investigation to the human VDACs. The over-oxidation of the cysteine residues, essentially irreversible in cell conditions, was as also certained in VDAC isoforms from human cells. 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Mass Spectrometry Analysis of Human VDAC3", "row_count": 11, "column_count": 5}, "table": {"label": "Table 3", "caption": "Comparison of the absolute intensities of molecular ions of selected sulfur containing tryptic peptides found in the analysis of hVDAC3 reduced with DTT, carboxyamidomethylated, and digested in-solution.", "rows": [["Peptide", "Position in the Sequence", "Measured Monoisotopic m/z", "Absolute Intensity", "Ratio Ox/Red"], ["GYGFGMVK", "21–28", "437.7098 (+2)", "1.46 × 104", "0.06"], ["GYGFGMVK", "429.7118 (+2)", "2.51 × 105"], ["SCSGVEFSTSGHAYTDTGK", "35–53", "991.4069 (+2)", "1.81 × 104", "0.2"], ["SCSGVEFSTSGHAYTDTGK", "995.9267 (+2)", "8.80 × 104"], ["YKVCNYGLTFTQK", "62–74", "806.8889 (+2)", "1.01 × 104", "0.05"], ["YKVCNYGLTFTQK", "811.4081 (+2)", "1.97 × 105"], ["DCFSVGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAK", "121–161", "1513.3688 (+3)", "1.74 × 104", "1.1"], ["DCFSVGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAK", "1508.0270 (+3)", "1.59 × 104"], ["YMLDCR", "225–230", "437.1832 (+2)", "5.88 × 105", "3.2"], ["YMLDCR", "429.1861 (+2)", "1.86 × 105"]], "row_count": 11, "column_count": 5, "numeric_cells": 30, "header_rows": 1, "locator": "section[5]/table-wrap[1]#ijms-21-01468-t003"}}, {"id": "asset:table:pmid:32098132:4", "role": "table", "format": "jats-table", "media_type": "application/vnd.jats.table+json", "uri": null, "sha256": "sha256:3b1153c7f5f12f187da81e6642e7c9dfc8595a97fa1ed80b8392b048e4889767", "bytes": 1406, "access": "open", "state": "verified", "reader": "read_table", "reader_status": "available", "identifier": "section[6]/table-wrap[1]#ijms-21-01468-t004", "version": null, "note": "Comparison of the oxidation state of cysteines in rat and human VDAC isoforms. p. o.: partially oxidized; t.o.: totally oxidized; t.r.: totally reduced; rat: VDACs from rat liver; hu: VDACs from human HAP1 cells. Cysteine residues are aligned in the same rows according to their presumed homology.", "structure": {"pmcid": "PMC7073118", "section_index": 6, "section_title": "3. Discussion", "row_count": 17, "column_count": 12}, "table": {"label": "Table 4", "caption": "Comparison of the oxidation state of cysteines in rat and human VDAC isoforms. p. o.: partially oxidized; t.o.: totally oxidized; t.r.: totally reduced; rat: VDACs from rat liver; hu: VDACs from human HAP1 cells. 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