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pmid:32395580
Dataset on interactors of the Arabidopsis thaliana Plant Natriuretic Peptide (AtPNP-A) determined by mass spectrometry.
Ilona Turek · Helen Irving · Chris Gehring
Data in brief · 2020 doi:10.1016/j.dib.2020.105606
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Experiment
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Complete file
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Upon biotin/streptavidin-based isolation of proteins bound to the pAtPNP-A or biotin, the proteins were separated by sodium dodecyl sulphate - polyacrylamide gel electrophoresis (SDS-PAGE), digested with trypsin and subjected to identification with liquid chromatography tandem mass spectrometry (LC-MS/MS). Label-free quantification of identified proteins allowed identification of binding partners of AtPNP-A, paving the way for pinpointing novel signal transduction pathways AtPNP-A is involved in. 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AT1G12900.4", "< 0.00010"], ["Aldolase-type TIM barrel family protein", "AT3G14415.1, AT3G14415.2, AT3G14415.3", "0.00011"], ["Ribosomal protein L3 family protein", "AT2G43030.1", "0.00011"], ["ATPase, F1 complex, alpha subunit protein", "AT2G07698.1", "0.00024"], ["Light harvesting complex photosystem II (LHCB4.3)", "AT2G40100.1", "0.00027"], ["Aldolase-type TIM barrel family protein", "AT3G14420.1, AT3G14420.2, AT3G14420.4, AT3G14420.5, AT3G14420.6", "0.00031"], ["Ribosomal protein L18e/L15 superfamily protein", "AT5G27850.1", "0.00041"], ["Photosystem I light harvesting complex gene 1 (LHCA1)", "AT3G54890.1, AT3G54890.4", "0.00053"], ["ATPase, F0 complex, subunit B/B', bacterial/chloroplast (ATPF)", "ATCG00130.1", "0.00066"], ["Ribosomal protein S3Ae", "AT3G04840.1", "0.001"], ["CLPC homologue 1 (CLPC)", "AT5G50920.1", "0.0013"], ["Ribosomal protein S11 family protein", "AT2G36160.1", "0.0014"], ["Cinnamate-4-hydroxylase (ATC4H)", "AT2G30490.1", "0.0018"], ["Ribosomal protein S13A (RPS13)", "AT4G00100.1", "0.0018"], ["Ribosomal protein L4/L1 family", "AT5G02870.1", "0.002"], ["Ribosomal protein S3 family protein", "AT2G31610.1", "0.0022"], ["Ribosomal protein S5 family protein", "AT2G41840.1", "0.0023"], ["Ribosomal protein S4 (RPS4A) family protein", "AT2G17360.1, AT5G07090.1, AT5G07090.2, AT5G58420.1", "0.0029"], ["Plastid transcriptionally active 16 (PTAC16)", "AT3G46780.1", "0.003"], ["Ribosomal protein L9 (RPL9)", "AT3G44890.1", "0.003"], ["Ribosomal protein L22p/L17e family protein", "AT1G67430.1, AT1G67430.2", "0.003"], ["6-phosphogluconate dehydrogenase family protein", "AT3G02360.1, AT3G02360.2", "0.0032"], ["Translocon at the inner envelope membrane of chloroplasts 110 (TIC110)", "AT1G06950.1", "0.0038"], ["Structural constituent of ribosome", "ATCG00800.1", "0.0041"], ["Actin 7 (ACT7)", "AT5G09810.1", "0.0047"], ["Cobalamin-independent synthase family protein (ATMS1)", "AT5G17920.1, AT5G17920.2", "0.0049"], ["Glutathione S-transferase phi 8 (GST6)", "AT2G47730.1", "0.0054"], ["Lipoxygenase 2 (LOX2)", "AT3G45140.1", "0.0064"], ["Serine transhydroxymethyltransferase 1 (SHM1)", "AT4G37930.1", "0.0074"], ["Ribosomal protein S15A (RPS15A)", "AT1G07770.1, AT1G07770.2, AT5G59850.1", "0.0078"], ["ATP synthase subunit beta (ATPB)", "ATCG00480.1", "0.0083"], ["Actin 8 (ACT8)", "AT1G49240.1, AT3G18780.2", "0.0089"], ["Ribosomal protein S5/Elongation factor G/III/V family protein (LOS1)", "AT1G56070.1", "0.011"], ["Light harvesting complex photosystem II (LHCB4.2)", "AT3G08940.2", "0.011"], ["Ribosomal protein 5B (RPS5B)", "AT2G37270.1, AT2G37270.2, AT3G11940.1, AT3G11940.2", "0.016"], ["Eukaryotic translation initiation factor (EIF4A-2)", "AT1G54270.1, AT1G72730.1, AT3G13920.1, AT3G13920.2, AT3G13920.3", "0.016"], ["Phosphoglycerate kinase 1 (PGK1)", "AT3G12780.1", "0.017"], ["Ribosomal protein L30/L7 family protein", "AT2G01250.1", "0.017"], ["Ribosomal protein S6e (RPS6B)", "AT5G10360.1", "0.017"], ["Ribosomal protein L2 (RPL2.1)", "ATCG00830.1, ATCG01310.1", "0.017"], ["Catalase 2 (CAT2)", "AT4G35090.1", "0.02"], ["Glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (GAPC)", "AT3G04120.1", "0.021"], ["Rieske (2Fe-2S) domain-containing protein", "AT1G71500.1", "0.024"], ["ADP/ATP carrier 1 (AAC1)", "AT3G08580.1, AT3G08580.2", "0.025"], ["RAB GTPase homolog E1B (RABE1b)", "AT4G20360.1", "0.025"], ["Mitochondrial substrate carrier family protein", "AT5G19760.1", "0.029"], ["H(+)-ATPase 2 (AHA2)", "AT4G30190.1", "0.031"], ["NAD(P)-binding Rossmann-fold superfamily protein", "AT4G35250.1", "0.033"], ["Formate dehydrogenase (FDH)", "AT5G14780.1", "0.034"], ["Heat shock cognate protein 70-1 (HSC70)", "AT5G02500.1", "0.034"], ["Mitochondrial lipoamide dehydrogenase 1 (mtLPD1)", "AT1G48030.1, AT1G48030.2", "0.035"], ["Cold, circadian rhythm, and RNA binding 2 (GRP7)", "AT2G21660.1", "0.036"], ["Chloroplast ribosomal protein S4 (RPS1)", "ATCG00380.1", "0.039"], ["Rubisco activase (RCA)", "AT2G39730.1", "0.04"], 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