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pmid:32796516
Intratumoral Adipocyte-High Breast Cancer Enrich for Metastatic and Inflammation-Related Pathways but Associated with Less Cancer Cell Proliferation.
Yoshihisa Tokumaru · Masanori Oshi · Eriko Katsuta · Li Yan · Jing Li Huang · Masayuki Nagahashi · Nobuhisa Matsuhashi · Manabu Futamura · Kazuhiro Yoshida · Kazuaki Takabe
International journal of molecular sciences · 2020 doi:10.3390/ijms21165744
Paper
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Experiment
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Data
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Analysis
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Execution
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Complete file
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The clinicopathological and transcriptomic data from 2256 patients with breast cancer were obtained based on three cohorts: The Cancer Genome Atlas (TCGA), GSE25066, and a study by Yau et al. For the current study, we defined the adipocyte, which is calculated by utilizing a computational algorithm, xCell, as \"intratumoral adipocyte\". These intratumoral adipocytes appropriately reflected mature adipocytes in a bulk tumor. The amount of intratumoral adipocytes demonstrated no relationship with survival. Intratumoral adipocyte-high tumors significantly enriched for metastasis and inflammation-related gene sets and are associated with a favorable tumor immune microenvironment, especially in the ER+/HER2- subtype. On the other hand, intratumoral adipocyte-low tumors significantly enriched for cell cycle and cell proliferation-related gene sets. 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