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pmid:32925750
Construction of a 6-gene prognostic signature to assess prognosis of patients with pancreatic cancer.
Jiayue Yang · Wei Shi · Shengwei Zhu · Cheng Yang
Medicine · 2020 doi:10.1097/MD.0000000000022092
Paper
complete
Experiment
partial
Data
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Analysis
complete
Execution
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Complete file
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Thus, it is imperative to further understand the potential carcinogenesis of PaCa and reliable prognostic models.The gene expression profile and clinical information of GSE21501 were downloaded from the Gene Expression Omnibus (GEO) database. Weighted gene co-expression network analysis (WGCNA) was applied to explore the potent genes associated with the overall survival (OS) events of PaCa patients. Cox regression model was applied to selecting prognostic genes and establish prognostic model. The prognostic values of six-gene signature were validated in TCGA-PAAD cohort.According to the WGCNA analysis, a total of 19 modules were identified and 115 hub genes in the mostly associated module were reserved for next analysis. According to the univariate and multivariate Cox regression analysis, we established a six-gene signature (FTSJ3, STAT1, STX2, CDX2, RASSF4, MACF1) which could effectively evaluate the overall survival (OS) of PaCa patients. 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