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pmid:32963529
Bioinformatic Identification of Neuroblastoma Microenvironment-Associated Biomarkers with Prognostic Value.
Yi Wang · Huan Luo · Jing Cao · Chao Ma
Journal of oncology · 2020 doi:10.1155/2020/5943014
Paper
complete
Experiment
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Data
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Analysis
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Execution
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Complete file
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Identification of the Independent Prognostic Value of Prognostic Genes", "row_count": 15, "column_count": 3}, "table": {"label": "Table 3", "caption": "The correlations between prognostic genes and the status of MYCN status tested by Spearman correlation.", "rows": [["Gene", "R", "p value"], ["ABCA6", "−0.433035927", "5.96E − 24"], ["SEPP1", "−0.43773706", "1.71E − 24"], ["SLAMF8", "−0.485479", "1.62E − 30"], ["GPR171", "−0.449936802", "6.05E − 26"], ["ABCA9", "−0.371500185", "1.40E − 17"], ["ARHGAP15", "−0.452056568", "3.34E − 26"], ["IL7R", "−0.457452749", "7.23E − 27"], ["HLA-DPB1", "−0.418455553", "2.55E − 22"], ["GZMA", "−0.411284919", "1.51E − 21"], ["GPR183", "−0.415347624", "5.55E − 22"], ["CCL19", "−0.462592772", "1.64E − 27"], ["ITK", "−0.483115504", "3.40E − 30"], ["FGL2", "−0.459540146", "3.97E − 27"], ["CD1C", "−0.466033388", "5.99E − 28"]], "row_count": 15, "column_count": 3, "numeric_cells": 32, "header_rows": 1, "locator": "section[20]/table-wrap[1]#tab3"}}, {"id": "asset:table:pmid:32963529:4", "role": "table", "format": "jats-table", "media_type": "application/vnd.jats.table+json", "uri": null, "sha256": "sha256:008ce78bd10e585894b88f1978275f17953794aec2e704ea0815cef6bdd2a28c", "bytes": 2161, "access": "open", "state": "verified", "reader": "read_table", "reader_status": "available", "identifier": "section[20]/table-wrap[2]#tab4", "version": null, "note": "The Cox analysis on prognostic genes and MYCN in the GSE49710 cohort.", "structure": {"pmcid": "PMC7501561", "section_index": 20, "section_title": "3.8. Identification of the Independent Prognostic Value of Prognostic Genes", "row_count": 17, "column_count": 9}, "table": {"label": "Table 4", "caption": "The Cox analysis on prognostic genes and MYCN in the GSE49710 cohort.", "rows": [["Variable", "Univariate Cox analysis", "Multivariate Cox analysis∗"], ["Coef", "HR (95% CI)", "z", "p value", "Coef", "HR (95% CI)", "z", "p value"], ["ABCA6", "−0.345", "0.708 (0.651–0.77)", "−8.1", "5.38E − 16", "0.0186", "1.02 (0.776–1.34)", "0.134", "0.894"], ["SEPP1", "−0.392", "0.676 (0.602–0.759)", "−6.64", "3.11E − 11", "−0.0928", "0.911 (0.644–1.29)", "−0.524", "0.6"], ["SLAMF8", "−0.505", "0.603 (0.537–0.677)", "−8.54", "1.29E − 17", "−0.274", "0.76 (0.586–0.986)", "−2.07", "0.0389"], ["GPR171", "−0.415", "0.66 (0.582–0.749)", "−6.44", "1.21E − 10", "−0.108", "0.898 (0.581–1.39)", "−0.484", "0.629"], ["ABCA9", "−0.387", "0.679 (0.613–0.753)", "−7.34", "2.10E − 13", "−0.303", "0.738 (0.574–0.95)", "−2.36", "0.0183"], ["ARHGAP15", "−0.393", "0.675 (0.598–0.763)", "−6.31", "2.77E − 10", "0.583", "1.79 (1.22–2.62)", "3", "0.00272"], ["IL7R", "−0.375", "0.687 (0.617–0.765)", "−6.86", "7.05E − 12", "−0.112", "0.894 (0.624–1.28)", "−0.607", "0.544"], ["HLA-DPB1", "−0.403", "0.668 (0.588–0.759)", "−6.21", "5.40E − 10", "0.0422", "1.04 (0.735–1.48)", "0.236", "0.813"], ["GZMA", "−0.305", "0.737 (0.666–0.816)", "−5.86", "4.62E − 09", "0.216", "1.24 (0.993–1.55)", "1.89", "0.0581"], ["GPR183", "−0.387", "0.679 (0.604–0.763)", "−6.51", "7.63E − 11", "−0.0716", "0.931 (0.746–1.16)", "−0.633", "0.527"], ["CCL19", "−0.184", "0.832 (0.783–0.884)", "−5.94", "2.81E − 09", "0.147", "1.16 (1.01–1.33)", "2.09", "0.0362"], ["ITK", "−0.35", "0.705 (0.641–0.775)", "−7.25", "4.04E − 13", "−0.125", "0.883 (0.662–1.18)", "−0.85", "0.395"], ["FGL2", "−0.383", "0.682 (0.612–0.76)", "−6.95", "3.66E − 12", "0.0172", "1.02 (0.677–1.53)", "0.0827", "0.934"], ["CD1C", "−0.356", "0.701 (0.64–0.767)", "−7.68", "1.65E − 14", "−0.235", "0.791 (0.633–0.989)", "−2.06", "0.0393"], ["MYCN amplification", "2.05", "7.8 (5.26–11.5)", "10.2", "1.19E − 24", "1.7", "5.45 (3.22–9.21)", "6.33", "2.48E − 10"]], "row_count": 17, "column_count": 9, "numeric_cells": 126, "header_rows": 2, "locator": "section[20]/table-wrap[2]#tab4"}}, {"id": "asset:table:pmid:32963529:5", "role": "table", "format": "jats-table", "media_type": "application/vnd.jats.table+json", "uri": null, "sha256": "sha256:503e7e438806afce2656613be4da4ee6ee96b2c38917fce4903758087e86460f", "bytes": 490, "access": "open", "state": "verified", "reader": "read_table", "reader_status": "available", "identifier": "section[20]/table-wrap[3]#tab5", "version": null, "note": "Prognostic genes identified related to the tumor microenvironment in neuroblastoma.", "structure": {"pmcid": "PMC7501561", "section_index": 20, "section_title": "3.8. 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