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pmid:32964027

MicroRNA-587 Functions as a Tumor Suppressor in Hepatocellular Carcinoma by Targeting Ribosomal Protein SA.

Miao Chen · Duo Wang · Junjie Liu · Zhizhan Zhou · Zhanling Ding · Lianfeng Liu · Danke Su · Hang Li

BioMed research international · 2020 doi:10.1155/2020/3280530

Paper

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Experiment

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Data

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Analysis

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title
MicroRNA-587 Functions as a Tumor Suppressor in Hepatocellular Carcinoma by Targeting Ribosomal Protein SA.
doi
10.1155/2020/3280530
pmid
32964027
authors array · 8 items
[0]
Miao Chen
[1]
Duo Wang
[2]
Junjie Liu
[3]
Zhizhan Zhou
[4]
Zhanling Ding
[5]
Lianfeng Liu
[6]
Danke Su
[7]
Hang Li
journal
BioMed research international
year
2020
abstract
BACKGROUND: Hepatocellular carcinoma (HCC) is one of the most highly aggressive cancer worldwide with an extremely poor prognosis. Evidence has revealed that microRNA-587 (miR-587) is abnormally expressed in a series of cancers. However, its expressions and functions in HCC have not been clearly acknowledged. METHODS: We detected the expression level of miR-587 both in the Gene Expression Omnibus (GEO) database and 86 paired clinical HCC tissues together with paired adjacent normal tissues by quantitative real-time PCR (qRT-PCR). Afterwards, the transfected HCC cell line SMMC-7721 cells were collected for the cell proliferation assay, cell-cycle arrest, cell migration, and invasion assays to explore the roles of miR-587 in regulating cellular function. In addition, bioinformatics analysis, combined with qRT-PCR and dual-luciferase reporter assays, were performed to confirm whether ribosomal protein SA (RPSA) mRNA was the direct target gene of miR-587. Moreover, the Cancer Genome Atlas (TCGA) and GEO databases as well as 86 paired clinical HCC tissues were used to verify the negative regulation between miR-587 and RPSA. RESULTS: In the present study, both the GEO database (GSE36915 and GSE74618) analysis and qRT-PCR analysis of 86 paired clinical tissues showed that miR-587 was significantly downregulated in HCC tissues. The overexpression of miR-587 inhibited proliferation, cell cycle, migration, and invasion in SMMC-7721 cells. In addition, miR-587 directly interacted with the 3'-untranslated region (UTR) of RPSA. Moreover, miR-587 overexpression directly suppressed RPSA expression, and the two genes were inversely expressed in HCC based on the analyses in TCGA and GEO (GSE36376) databases and qPCR analysis of 86 paired clinical tissues. CONCLUSION: Our results demonstrate that miR-587 is downexpressed in HCC and regulates the cellular function by targeting RPSA.
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Additionally, a paired t-test was performed to analyze the relative expressions of miR-587 and RPSA in clinical HCC tissues compared with adjacent normal tissues.
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Additionally, a paired t-test was performed to analyze the relative expressions of miR-587 and RPSA in clinical HCC tissues compared with adjacent normal tissues.
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The data used to support the findings of this study are available from the corresponding author upon request.
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Gene Expression Profiles of both tumor and adjacent non-tumor liver Identify Hepatocellular Carcinoma Patients at High Risk of Recurrence after Curative Hepatectomy
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GSM906983
sample_count
89
group_sizes
null
group_sizes_basis
null
platform
8179
taxon
Homo sapiens
title
MicroRNA-214 downregulation contributes to tumor angiogenesis via inducing secretion of hepatoma-derived growth factor in human hepatoma
resolution_checked_at
2026-11-01T15:39:54Z
resolution_check
identifier_resolution_only_no_download_no_licence_read
downloaded
false
licence_read
false
[3] object · 15 fields
id
data:geo:GSE74618
role
raw
format
geo-series
media_type
application/vnd.ncbi.geo-series+json
uri
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE74618
sha256
null
bytes
null
access
open
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resolved
reader
null
reader_status
reader_required
identifier
GSE74618
version
null
note
The data used to support the findings of this study are available from the corresponding author upon request.
structure object · 15 fields
repository
GEO
access_route
GEO accession URL
access_statement_verbatim
The data used to support the findings of this study are available from the corresponding author upon request.
access_statement_kind
data_availability_statement
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sample_count
250
group_sizes
null
group_sizes_basis
null
platform
14613
taxon
Homo sapiens; synthetic construct
title
Re-expression of fetal IGF2 as a target for hepatocellular carcinoma therapy
resolution_checked_at
2026-11-01T15:39:55Z
resolution_check
identifier_resolution_only_no_download_no_licence_read
downloaded
false
licence_read
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gaps array · 6 items
[0]
asset:data:geo:GSE36376 not downloaded
[1]
asset:data:geo:GSE36376 licence not read
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[3]
asset:data:geo:GSE36915 licence not read
[4]
asset:data:geo:GSE74618 not downloaded
[5]
asset:data:geo:GSE74618 licence not read
analysis object · 4 fields
state
partial
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[0] object · 10 fields
id
method-1
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null
specific
null
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paired t-test
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1
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quote
Additionally, a paired t-test was performed to analyze the relative expressions of miR-587 and RPSA in clinical HCC tissues compared with adjacent normal tissues.
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gaps array · 1 item
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method.reader_named_unmapped
capability object · 3 fields
state
complete
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[0] object · 6 fields
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capability:computational_analysis
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meta_analysis
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differential_expression
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gwas
candidate
Automated Assays Laravel application and simulated adapters
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readiness object · 8 fields
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blocked
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blocked_on
method:not_determinable
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tier
R4
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false
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basis
The reader quoted the method the paper names (paired t-test), but the corpus's method extractor could not map it onto a DSL operation, so the method is published but not expressible.
capability object · 4 fields
tier
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capability_id
capability:computational_analysis
availability_state
owned
basis
The computational analysis is owned. The physical bench the paper used is not, so a physical validation cannot be run here.
data object · 6 fields
tier
R1
reachable
true
accessions array · 3 items
[0]
GSE36915
[1]
GSE74618
[2]
GSE36376
resolved_accessions array · 3 items
[0]
GSE36915
[1]
GSE74618
[2]
GSE36376
statements array · 1 item
[0]
The data used to support the findings of this study are available from the corresponding author upon request.
basis
The paper names GSE36915, GSE74618, GSE36376 in Gene Expression Omnibus (GEO) and the accession resolves in the repository. No dataset was downloaded and no licence was read.
can_run object · 3 fields
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assets array · 2 items
[0]
source:pmid:32964027
[1]
data:geo:GSE36376
steps array · 1 item
[0]
run_analysis
must_build object · 5 fields
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data_gaps array · 1 item
[0]
data:geo:GSE36376
gaps array · 1 item
[0]
method:not_determinable
review object · 5 fields
state
partial
machine_critique object · 5 fields
kind
extraction_review
reader object · 5 fields
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MiniMax-M3.1-Flash
provider
minimax
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minimax
read_at
2026-10-31T18:22:51Z
independence
single_reader
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method
verbatim
availability
verbatim
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3
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stages array · 1 item
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extraction
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review.human_critique
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execution.not_run
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paper
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pmid:32964027
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source:pmid:32964027
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manuscript
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PMID 32964027 full text
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data:geo:GSE36376
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dataset
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GEO GSE36376
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activity-reading-sci-2026-11-01
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classification
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paper
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source:pmid:32964027
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PMID 32964027 full text
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data:geo:GSE36376
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GEO GSE36376
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agent:corpus-assay-engine
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activity-read-32964027
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extraction
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source:pmid:32964027
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agent:minimax-reader
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agent:corpus-assay-engine
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[1]
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[3]
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[4]
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[5]
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[6]
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[8]
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[9]
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[0] object · 11 fields
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99e1195c7d6f
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[0]
ive real-time PCR (qRT-PCR). Afterwards, the transfected HCC cell line SMMC-7721 cells were collected
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Complete file
{"sci_version": "1.2", "schema": "https://corpus.bntrg.co.uk/sci/1.0/sci.schema.json", "id": "pmid:32964027", "kind": "science-record", "revision": 3, "content_hash": "sha256:8fe16ea619d0aa974a0586804a94815bf6c42788fbcba2306fa84f4b9bfb64bf", "created_at": "2026-11-01T15:41:11Z", "updated_at": "2026-11-01T21:23:50Z", "generator": {"name": "corpus-assay-engine", "run_id": "reading-sci-2026-11-01"}, "paper": {"state": "complete", "title": "MicroRNA-587 Functions as a Tumor Suppressor in Hepatocellular Carcinoma by Targeting Ribosomal Protein SA.", "doi": "10.1155/2020/3280530", "pmid": "32964027", "authors": ["Miao Chen", "Duo Wang", "Junjie Liu", "Zhizhan Zhou", "Zhanling Ding", "Lianfeng Liu", "Danke Su", "Hang Li"], "journal": "BioMed research international", "year": 2020, "abstract": "BACKGROUND: Hepatocellular carcinoma (HCC) is one of the most highly aggressive cancer worldwide with an extremely poor prognosis. Evidence has revealed that microRNA-587 (miR-587) is abnormally expressed in a series of cancers. However, its expressions and functions in HCC have not been clearly acknowledged.\nMETHODS: We detected the expression level of miR-587 both in the Gene Expression Omnibus (GEO) database and 86 paired clinical HCC tissues together with paired adjacent normal tissues by quantitative real-time PCR (qRT-PCR). Afterwards, the transfected HCC cell line SMMC-7721 cells were collected for the cell proliferation assay, cell-cycle arrest, cell migration, and invasion assays to explore the roles of miR-587 in regulating cellular function. In addition, bioinformatics analysis, combined with qRT-PCR and dual-luciferase reporter assays, were performed to confirm whether ribosomal protein SA (RPSA) mRNA was the direct target gene of miR-587. Moreover, the Cancer Genome Atlas (TCGA) and GEO databases as well as 86 paired clinical HCC tissues were used to verify the negative regulation between miR-587 and RPSA.\nRESULTS: In the present study, both the GEO database (GSE36915 and GSE74618) analysis and qRT-PCR analysis of 86 paired clinical tissues showed that miR-587 was significantly downregulated in HCC tissues. The overexpression of miR-587 inhibited proliferation, cell cycle, migration, and invasion in SMMC-7721 cells. In addition, miR-587 directly interacted with the 3'-untranslated region (UTR) of RPSA. Moreover, miR-587 overexpression directly suppressed RPSA expression, and the two genes were inversely expressed in HCC based on the analyses in TCGA and GEO (GSE36376) databases and qPCR analysis of 86 paired clinical tissues.\nCONCLUSION: Our results demonstrate that miR-587 is downexpressed in HCC and regulates the cellular function by targeting RPSA.", "claims": [{"id": "claim-method", "statement": "Additionally, a paired t-test was performed to analyze the relative expressions of miR-587 and RPSA in clinical HCC tissues compared with adjacent normal tissues.", "kind": "methodological", "target": null, "evidence": [{"asset": "source:pmid:32964027", "locator": "sections[13] \"3. 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Afterwards, the transfected HCC cell line SMMC-7721 cells were collected"], "order_basis": "paper_text_order:615", "id": "assay:1"}]}