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pmid:32964035

SRCIN1 Regulated by circCCDC66/miR-211 Is Upregulated and Promotes Cell Proliferation in Non-Small-Cell Lung Cancer.

Weijun Hong · Suyun Yu · Yaqing Zhuang · Qingqing Zhang · Jiqin Wang · Xiwen Gao

BioMed research international · 2020 doi:10.1155/2020/5307641

Paper

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title
SRCIN1 Regulated by circCCDC66/miR-211 Is Upregulated and Promotes Cell Proliferation in Non-Small-Cell Lung Cancer.
doi
10.1155/2020/5307641
pmid
32964035
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Weijun Hong
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Suyun Yu
[2]
Yaqing Zhuang
[3]
Qingqing Zhang
[4]
Jiqin Wang
[5]
Xiwen Gao
journal
BioMed research international
year
2020
abstract
The incidence and mortality of lung cancer were extremely high. The present study showed that SRCIN1 was an oncogene in non-small-cell lung cancer (NSCLC). Public dataset analysis showed SRCIN1 was significantly overexpressed in NSCLC samples. Also, we found that NSCLC patients with higher SRCIN1 expression had shorter OS time by analyzing TCGA, Kaplan-Meier Plotter, GSE30219, GSE50081, and GSE19188 databases. Overexpression or knockdown of SRCIN1 significantly induced or reduced A549 and H1299 cell proliferation. Furthermore, we found SRCIN1 was directly targeted by miR-211. Overexpression or knockdown of miR-211 suppressed or induced SRCIN1 levels in NSCLC. Moreover, we found that miR-211 affected NSCLC cell proliferation through SRCIN1. Previous studies demonstrated that circRNAs could act as miRNA sponges in cancer cells. In this study, we showed that knockdown of circCCDC66 induced expression of miR-211. Luciferase assay demonstrated that miR-211 suppressed the activity of luciferase reporter-contained circCCDC66 sequences. Moreover, knockdown of circCCDC66 significantly inhibited SRCIN1 levels in both A549 and H1299 cells. These results showed that circCCDC66 acted as a miRNA sponge to affect the miR-211/SRCIN1 axis. Of note, we for the first time revealed that circCCDC66 suppression reduced cell proliferation by about 65% in A549 and by about 40% in H1299 cells. We thought this study could provide novel potential biomarkers for NSCLC.
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geo-series
media_type
application/vnd.ncbi.geo-series+json
uri
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE50081
sha256
null
bytes
null
access
open
state
resolved
reader
null
reader_status
reader_required
identifier
GSE50081
version
null
note
The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
structure object · 15 fields
repository
GEO
access_route
GEO accession URL
access_statement_verbatim
The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
access_statement_kind
data_availability_statement
sample_accessions array · 181 items
[0]
GSM1213669
[1]
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[2]
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[22]
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[29]
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[30]
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[31]
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[32]
GSM1213701
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[34]
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[39]
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[40]
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[41]
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[42]
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[43]
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[44]
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GSM1213714
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GSM1213715
[47]
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[48]
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[49]
GSM1213718
[50]
GSM1213719
[51]
GSM1213720
[52]
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[53]
GSM1213722
[54]
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[55]
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[57]
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[58]
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[59]
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[60]
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[61]
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[62]
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[63]
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[64]
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[65]
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[66]
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[67]
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[68]
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[69]
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[70]
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[71]
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[72]
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[73]
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[74]
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[75]
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[76]
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[77]
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[79]
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[80]
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[93]
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[95]
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[110]
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[113]
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[114]
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[124]
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[134]
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[135]
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[136]
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[137]
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[138]
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[139]
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[140]
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[142]
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[143]
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[144]
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[145]
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[146]
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[147]
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[148]
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[149]
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[150]
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[152]
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[153]
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[154]
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[155]
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[156]
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[157]
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[158]
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[159]
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[160]
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[162]
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[163]
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[164]
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[165]
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[166]
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[167]
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[180]
GSM1213849
sample_count
181
group_sizes
null
group_sizes_basis
null
platform
570
taxon
Homo sapiens
title
Validation of a histology-independent prognostic gene signature for early stage, non-small cell lung cancer including stage IA patients
resolution_checked_at
2026-11-01T15:39:54Z
resolution_check
identifier_resolution_only_no_download_no_licence_read
downloaded
false
licence_read
false
gaps array · 6 items
[0]
asset:data:geo:GSE19188 not downloaded
[1]
asset:data:geo:GSE19188 licence not read
[2]
asset:data:geo:GSE30219 not downloaded
[3]
asset:data:geo:GSE30219 licence not read
[4]
asset:data:geo:GSE50081 not downloaded
[5]
asset:data:geo:GSE50081 licence not read
analysis object · 4 fields
state
partial
methods array · 5 items
[0] object · 10 fields
id
method-1
family
group_comparison
specific
student_t_test
label
Group comparison
dsl_operations array · 0 items
missing_operations array · 1 item
[0]
student_t
expressible
false
parameters object · 0 fields
data_shapes array · 1 item
[0]
two_or_more_groups_continuous
evidence object · 3 fields
score
0.8
band
high
quote
Student's t-test
[1] object · 10 fields
id
method-2
family
survival_analysis
specific
kaplan_meier
label
Survival analysis
dsl_operations array · 1 item
[0]
survival_km
missing_operations array · 0 items
parameters object · 0 fields
data_shapes array · 1 item
[0]
time_to_event_with_censoring
evidence object · 3 fields
score
0.7
band
medium
quote
Kaplan-Meier
[2] object · 10 fields
id
method-3
family
differential_expression
specific
limma_voom
label
Differential expression analysis
dsl_operations array · 3 items
[0]
normalise_counts
[1]
differential_expression_fit
[2]
fdr_bh
missing_operations array · 0 items
parameters object · 0 fields
data_shapes array · 1 item
[0]
count_matrix_with_condition
evidence object · 3 fields
score
0.8
band
high
quote
limma
[3] object · 10 fields
id
method-4
family
correlation_analysis
specific
pearson
label
Correlation analysis
dsl_operations array · 1 item
[0]
pearson_r
missing_operations array · 0 items
parameters object · 0 fields
data_shapes array · 1 item
[0]
paired_numeric_columns
evidence object · 3 fields
score
0.8
band
high
quote
Pearson correlation
[4] object · 10 fields
id
method-5
family
null
specific
null
label
paired-sample t-test
dsl_operations array · 0 items
missing_operations array · 0 items
parameters object · 0 fields
data_shapes array · 0 items
evidence object · 3 fields
score
1
band
verbatim
quote
The differences between tumor and normal tissues were counted by paired-sample t-test.
targets array · 0 items
gaps array · 2 items
[0]
method.reader_named_unmapped
[1]
method.student_t
capability object · 3 fields
state
complete
requirements array · 1 item
[0] object · 6 fields
capability_id
capability:computational_analysis
label
Computational analysis platform
assay_families array · 9 items
[0]
meta_analysis
[1]
machine_learning
[2]
survival_analysis
[3]
statistical_regression
[4]
pca
[5]
molecular_docking
[6]
network_analysis
[7]
differential_expression
[8]
gwas
candidate
Automated Assays Laravel application and simulated adapters
gaps array · 0 items
readiness object · 8 fields
state
complete
tier
R1
blocked_on
nothing:replicable_now
axes object · 3 fields
method object · 5 fields
tier
R1
expressible
false
required_operations array · 0 items
missing_operations array · 1 item
[0]
student_t
basis
The paper names the method it used and the corpus's method extractor maps it onto the DSL catalogue: student_t_test.
capability object · 4 fields
tier
R1
capability_id
capability:computational_analysis
availability_state
owned
basis
The computational analysis is owned. The physical bench the paper used is not, so a physical validation cannot be run here.
data object · 6 fields
tier
R1
reachable
true
accessions array · 3 items
[0]
GSE30219
[1]
GSE50081
[2]
GSE19188
resolved_accessions array · 3 items
[0]
GSE30219
[1]
GSE50081
[2]
GSE19188
statements array · 1 item
[0]
The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
basis
The paper names GSE30219, GSE50081, GSE19188 in GSE30219 and the accession resolves in the repository. No dataset was downloaded and no licence was read.
can_run object · 3 fields
dsl_operations array · 0 items
assets array · 2 items
[0]
source:pmid:32964035
[1]
data:geo:GSE19188
steps array · 0 items
must_build object · 5 fields
dsl_operations array · 1 item
[0] object · 3 fields
operation
student_t
priority
null
converters array · 0 items
readers array · 0 items
capabilities array · 0 items
data_gaps array · 1 item
[0]
data:geo:GSE19188
gaps array · 0 items
review object · 5 fields
state
partial
machine_critique object · 5 fields
kind
extraction_review
reader object · 5 fields
model
MiniMax-M3.1-Flash
provider
minimax
provider_family
minimax
read_at
2026-10-31T18:22:49Z
independence
single_reader
evidence_check object · 2 fields
method
verbatim
availability
verbatim
calls
3
usage object · 3 fields
prompt_tokens
27961
completion_tokens
1653
cached_tokens
9480
stages array · 1 item
[0] object · 4 fields
id
extraction
state
complete
reader
MiniMax-M3.1-Flash
provider
minimax
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[0]
review.independent_reader
[1]
review.machine_critique
[2]
review.human_critique
execution object · 5 fields
state
absent
status
not_run
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null
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gaps array · 1 item
[0]
execution.not_run
provenance object · 7 fields
entities array · 3 items
[0] object · 3 fields
id
pmid:32964035
type
paper
label
pmid:32964035
[1] object · 3 fields
id
source:pmid:32964035
type
manuscript
label
PMID 32964035 full text
[2] object · 3 fields
id
data:geo:GSE19188
type
dataset
label
GEO GSE19188
activities array · 3 items
[0] object · 4 fields
id
activity-reading-sci-2026-11-01
type
classification
used array · 3 items
[0] object · 3 fields
id
pmid:32964035
type
paper
label
pmid:32964035
[1] object · 3 fields
id
source:pmid:32964035
type
manuscript
label
PMID 32964035 full text
[2] object · 3 fields
id
data:geo:GSE19188
type
dataset
label
GEO GSE19188
agent
agent:corpus-assay-engine
[1] object · 4 fields
id
activity-read-32964035
type
extraction
used array · 1 item
[0]
source:pmid:32964035
agent
agent:minimax-reader
[2] object · 4 fields
id
activity-resolve-GSE19188
type
accession_resolution
used array · 1 item
[0]
data:geo:GSE19188
agent
agent:corpus-assay-engine
agents array · 2 items
[0] object · 3 fields
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agent:corpus-assay-engine
type
software
label
Corpus assay engine
[1] object · 3 fields
id
agent:minimax-reader
type
software
label
MiniMax literature reader
source_run_id
reading-sci-2026-11-01
dsl_catalogue_fingerprint
343fb30756ba6ec3
capability_table_fingerprint
2cb3e42f047d2ecf
snapshot_id
ba34b49490d9bfaf
lineage object · 4 fields
parent_id
pmid:32964035
parent_hash
sha256:a3a95ee1c96054821e12e09cb5824d1e53c297452f656a88320e0ff99261effd
fork_of
null
gaps array · 13 items
[0]
asset:data:geo:GSE19188 licence not read
[1]
asset:data:geo:GSE19188 not downloaded
[2]
asset:data:geo:GSE30219 licence not read
[3]
asset:data:geo:GSE30219 not downloaded
[4]
asset:data:geo:GSE50081 licence not read
[5]
asset:data:geo:GSE50081 not downloaded
[6]
execution.not_run
[7]
method.reader_named_unmapped
[8]
method.student_t
[9]
review.human_critique
[10]
review.independent_reader
[11]
review.machine_critique
[12]
step:run_analysis blocked on method:student_t
assays array · 3 items
[0] object · 11 fields
role
data_generation
definition_id
transfection
definition_version
99e1195c7d6f
required_operations array · 0 items
support_state
partial
source_hashes object · 1 field
assay_lexicon
99e1195c7d6f
confidence
0.99
evidence array · 4 items
[0]
1, and GSE19188 databases. Overexpression or knockdown of SRCIN1 significantly induced or reduced A
[1]
ectly targeted by miR-211. Overexpression or knockdown of miR-211 suppressed or induced SRCIN1 leve
[2]
cancer cells. In this study, we showed that knockdown of circCCDC66 induced expression of miR-211.
[3]
er-contained circCCDC66 sequences. Moreover, knockdown of circCCDC66 significantly inhibited SRCIN1
order_basis
paper_text_order:504
id
assay:1
[1] object · 11 fields
role
data_generation
definition_id
cell_culture
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99e1195c7d6f
required_operations array · 0 items
support_state
partial
source_hashes object · 1 field
assay_lexicon
99e1195c7d6f
confidence
0.99
evidence array · 3 items
[0]
n of SRCIN1 significantly induced or reduced A549 and H1299 cell proliferation. Furthermore, w
[1]
ignificantly inhibited SRCIN1 levels in both A549 and H1299 cells. These results showed that c
[2]
n reduced cell proliferation by about 65% in A549 and by about 40% in H1299 cells. We thought
order_basis
paper_text_order:557
id
assay:2
[2] object · 11 fields
role
analysis
definition_id
group_comparison
definition_version
f2132e96ae6c7a4e
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support_state
partial
source_hashes object · 1 field
dsl_catalogue
f2132e96ae6c7a4e
evidence array · 1 item
[0]
Student's t-test
order_basis
consumes_earlier_output
id
assay:3
Complete file
{"sci_version": "1.2", "schema": "https://corpus.bntrg.co.uk/sci/1.0/sci.schema.json", "id": "pmid:32964035", "kind": "science-record", "revision": 7, "content_hash": "sha256:87dcb76d3811ced16c2e81bcf9370746a121daffe6728d94c08a3c055b97088d", "created_at": "2026-11-01T15:41:11Z", "updated_at": "2026-11-01T22:02:14Z", "generator": {"name": "corpus-assay-engine", "run_id": "reading-sci-2026-11-01"}, "paper": {"state": "complete", "title": "SRCIN1 Regulated by circCCDC66/miR-211 Is Upregulated and Promotes Cell Proliferation in Non-Small-Cell Lung Cancer.", "doi": "10.1155/2020/5307641", "pmid": "32964035", "authors": ["Weijun Hong", "Suyun Yu", "Yaqing Zhuang", "Qingqing Zhang", "Jiqin Wang", "Xiwen Gao"], "journal": "BioMed research international", "year": 2020, "abstract": "The incidence and mortality of lung cancer were extremely high. The present study showed that SRCIN1 was an oncogene in non-small-cell lung cancer (NSCLC). Public dataset analysis showed SRCIN1 was significantly overexpressed in NSCLC samples. Also, we found that NSCLC patients with higher SRCIN1 expression had shorter OS time by analyzing TCGA, Kaplan-Meier Plotter, GSE30219, GSE50081, and GSE19188 databases. Overexpression or knockdown of SRCIN1 significantly induced or reduced A549 and H1299 cell proliferation. Furthermore, we found SRCIN1 was directly targeted by miR-211. Overexpression or knockdown of miR-211 suppressed or induced SRCIN1 levels in NSCLC. Moreover, we found that miR-211 affected NSCLC cell proliferation through SRCIN1. Previous studies demonstrated that circRNAs could act as miRNA sponges in cancer cells. In this study, we showed that knockdown of circCCDC66 induced expression of miR-211. Luciferase assay demonstrated that miR-211 suppressed the activity of luciferase reporter-contained circCCDC66 sequences. Moreover, knockdown of circCCDC66 significantly inhibited SRCIN1 levels in both A549 and H1299 cells. These results showed that circCCDC66 acted as a miRNA sponge to affect the miR-211/SRCIN1 axis. Of note, we for the first time revealed that circCCDC66 suppression reduced cell proliferation by about 65% in A549 and by about 40% in H1299 cells. We thought this study could provide novel potential biomarkers for NSCLC.", "claims": [{"id": "claim-method", "statement": "The differences between tumor and normal tissues were counted by paired-sample t-test.", "kind": "methodological", "target": null, "evidence": [{"asset": "source:pmid:32964035", "locator": "sections[10] \"2.8. Statistical Analysis\" paragraph 2", "quote": "The differences between tumor and normal tissues were counted by paired-sample t-test."}], "state": "complete"}, {"id": "claim-data-access", "statement": "The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.", "kind": "methodological", "target": null, "evidence": [{"asset": "source:pmid:32964035", "locator": "sections[20] \"Data Availability\" paragraph 2", "quote": "The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request."}], "state": "complete"}], "gaps": []}, "experiment": {"state": "partial", "objective": null, "steps": [{"id": "read_published_estimate", "order": 1, "name": "Read the published estimate from the source", "kind": "other", "state": "complete", "blocked_on": null, "description": "The claim, method and evidence span published with the source article.", "duration_hours": null, "parameters": {}, "inputs": ["source:pmid:32964035"], "outputs": ["the published estimate and its evidence"], "instruments": [], "reagents": []}, {"id": "obtain_source_data", "order": 2, "name": "Obtain the source data from the named repository", "kind": "data-preparation", "state": "complete", "blocked_on": null, "description": "The GEO series accession resolves and its sample accessions are listed. This lane did not download the dataset or read its licence.", "duration_hours": null, "parameters": {}, "inputs": ["data:geo:GSE19188"], "outputs": ["the source data with its repository provenance"], "instruments": [], "reagents": []}, {"id": "run_analysis", "order": 3, "name": "Run the published analysis", "kind": "analysis", "state": "blocked", "blocked_on": "method:student_t", "description": "Apply the paper's statistical method to the resolved series and compare the result with the published target.", "duration_hours": null, "parameters": {}, "inputs": ["data:geo:GSE19188"], "outputs": ["the replicated result and its comparison"], "instruments": [], "reagents": []}], "materials": [], "instruments": [], "reagents": [], "conditions": {}, "gaps": ["step:run_analysis blocked on method:student_t"]}, "data": {"state": "partial", "assets": [{"id": "source:pmid:32964035", "role": "manuscript", "format": "xml", "media_type": "application/xml", "uri": "https://doi.org/10.1155/2020/5307641", 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Overexpression or knockdown of SRCIN1 significantly induced or reduced A", "ectly targeted by miR-211. Overexpression or knockdown of miR-211 suppressed or induced SRCIN1 leve", "cancer cells. In this study, we showed that knockdown of circCCDC66 induced expression of miR-211.", "er-contained circCCDC66 sequences. Moreover, knockdown of circCCDC66 significantly inhibited SRCIN1"], "order_basis": "paper_text_order:504", "id": "assay:1"}, {"role": "data_generation", "definition_id": "cell_culture", "definition_version": "99e1195c7d6f", "definition_digest": null, "required_operations": [], "support_state": "partial", "source_hashes": {"assay_lexicon": "99e1195c7d6f"}, "confidence": 0.99, "evidence": ["n of SRCIN1 significantly induced or reduced A549 and H1299 cell proliferation. Furthermore, w", "ignificantly inhibited SRCIN1 levels in both A549 and H1299 cells. These results showed that c", "n reduced cell proliferation by about 65% in A549 and by about 40% in H1299 cells. 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