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pmid:33613584

Light Regulates the Cytokinin-Dependent Cold Stress Responses in Arabidopsis.

Sylva Prerostova · Martin Černý · Petre I Dobrev · Vaclav Motyka · Lucia Hluskova · Barbara Zupkova · Alena Gaudinova · Vojtech Knirsch · Tibor Janda · Bretislav Brzobohatý · Radomira Vankova

Frontiers in plant science · 2020 doi:10.3389/fpls.2020.608711

Paper

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Experiment

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Data

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2026-11-01T15:41:25Z
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title
Light Regulates the Cytokinin-Dependent Cold Stress Responses in Arabidopsis.
doi
10.3389/fpls.2020.608711
pmid
33613584
authors array · 11 items
[0]
Sylva Prerostova
[1]
Martin Černý
[2]
Petre I Dobrev
[3]
Vaclav Motyka
[4]
Lucia Hluskova
[5]
Barbara Zupkova
[6]
Alena Gaudinova
[7]
Vojtech Knirsch
[8]
Tibor Janda
[9]
Bretislav Brzobohatý
[10]
Radomira Vankova
journal
Frontiers in plant science
year
2020
abstract
To elucidate the effect of light intensity on the cold response (5°C; 7 days) in Arabidopsis thaliana, we compared the following parameters under standard light (150 μmol m-2 s-1), low light (20 μmol m-2 s-1), and dark conditions: membrane damage, photosynthetic parameters, cytokinin oxidase/dehydrogenase (CKX) activity, phytohormone levels, and transcription of selected stress- and hormone-related genes and proteome. The impact of cytokinins (CKs), hormones directly interacting with the light signaling pathway, on cold responses was evaluated using transformants overexpressing CK biosynthetic gene isopentenyl transferase (DEX:IPT) or CK degradation gene HvCKX2 (DEX:CKX) under a dexamethasone-inducible promoter. In wild-type plants, cold treatment under light conditions caused down-regulation of CKs (in shoots) and auxin, while abscisic acid (ABA), jasmonates, and salicylic acid (SA) were up-regulated, especially under low light. Cold treatment in the dark strongly suppressed all phytohormones, except ABA. DEX:IPT plants showed enhanced stress tolerance associated with elevated CK and SA levels in shoots and auxin in apices. Contrarily, DEX:CKX plants had weaker stress tolerance accompanied by lowered levels of CKs and auxins. Nevertheless, cold substantially diminished the impact from the inserted genes. Cold stress in dark minimized differences among the genotypes. Cold treatments in light strongly up-regulated stress marker genes RD29A, especially in roots, and CBF1-3 in shoots. Under control conditions, their levels were higher in DEX:CKX plants, but after 7-day stress, DEX:IPT plants exhibited the highest transcription. Transcription of genes related to CK metabolism and signaling showed a tendency to re-establish, at least partially, CK homeostasis in both transformants. Up-regulation of strigolactone-related genes in apices and leaves indicated their role in suppressing shoot growth. The analysis of leaf proteome revealed over 20,000 peptides, representing 3,800 proteins and 2,212 protein families (data available via ProteomeXchange, identifier PXD020480). Cold stress induced proteins involved in ABA and jasmonate metabolism, antioxidant enzymes, and enzymes of flavonoid and glucosinolate biosynthesis. DEX:IPT plants up-regulated phospholipase D and MAP-kinase 4. Cold stress response at the proteome level was similar in all genotypes under optimal light intensity, differing significantly under low light. The data characterized the decisive effect of light-CK cross-talk in the regulation of cold stress responses.
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sections[9] "Proteomic Analysis" paragraph 2
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The quantitative differences were determined by Minora, employing precursor ion quantification followed by normalization and a background-based t test.
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The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found below: https://www.ebi.ac.uk/pride/archive/projects/PXD020480.
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Arabidopsis proteome in the tripartite interaction between cytokinin, light and temperature
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Photosynthetic photon flux density (μmol m–2 s–1)
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Distinct Effect of Dark on Photosynthetic Parameters in Comparison With Light at a Wide Range of Intensities
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0.821 ± 0.015
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0.822 ± 0.008
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ab
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0.853 ± 0.005
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ab
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assay:1
Complete file
{"sci_version": "1.2", "schema": "https://corpus.bntrg.co.uk/sci/1.0/sci.schema.json", "id": "pmid:33613584", "kind": "science-record", "revision": 6, "content_hash": "sha256:ef60640a660eb935be9429d15eefdf4075e398cbc53b102a098fa3ebe9e0b3d8", "created_at": "2026-11-01T15:41:25Z", "updated_at": "2026-11-01T21:24:41Z", "generator": {"name": "corpus-assay-engine", "run_id": "reading-sci-2026-11-01"}, "paper": {"state": "complete", "title": "Light Regulates the Cytokinin-Dependent Cold Stress Responses in Arabidopsis.", "doi": "10.3389/fpls.2020.608711", "pmid": "33613584", "authors": ["Sylva Prerostova", "Martin Černý", "Petre I Dobrev", "Vaclav Motyka", "Lucia Hluskova", "Barbara Zupkova", "Alena Gaudinova", "Vojtech Knirsch", "Tibor Janda", "Bretislav Brzobohatý", "Radomira Vankova"], "journal": "Frontiers in plant science", "year": 2020, "abstract": "To elucidate the effect of light intensity on the cold response (5°C; 7 days) in Arabidopsis thaliana, we compared the following parameters under standard light (150 μmol m-2 s-1), low light (20 μmol m-2 s-1), and dark conditions: membrane damage, photosynthetic parameters, cytokinin oxidase/dehydrogenase (CKX) activity, phytohormone levels, and transcription of selected stress- and hormone-related genes and proteome. The impact of cytokinins (CKs), hormones directly interacting with the light signaling pathway, on cold responses was evaluated using transformants overexpressing CK biosynthetic gene isopentenyl transferase (DEX:IPT) or CK degradation gene HvCKX2 (DEX:CKX) under a dexamethasone-inducible promoter. In wild-type plants, cold treatment under light conditions caused down-regulation of CKs (in shoots) and auxin, while abscisic acid (ABA), jasmonates, and salicylic acid (SA) were up-regulated, especially under low light. Cold treatment in the dark strongly suppressed all phytohormones, except ABA. DEX:IPT plants showed enhanced stress tolerance associated with elevated CK and SA levels in shoots and auxin in apices. Contrarily, DEX:CKX plants had weaker stress tolerance accompanied by lowered levels of CKs and auxins. Nevertheless, cold substantially diminished the impact from the inserted genes. Cold stress in dark minimized differences among the genotypes. Cold treatments in light strongly up-regulated stress marker genes RD29A, especially in roots, and CBF1-3 in shoots. Under control conditions, their levels were higher in DEX:CKX plants, but after 7-day stress, DEX:IPT plants exhibited the highest transcription. Transcription of genes related to CK metabolism and signaling showed a tendency to re-establish, at least partially, CK homeostasis in both transformants. Up-regulation of strigolactone-related genes in apices and leaves indicated their role in suppressing shoot growth. The analysis of leaf proteome revealed over 20,000 peptides, representing 3,800 proteins and 2,212 protein families (data available via ProteomeXchange, identifier PXD020480). Cold stress induced proteins involved in ABA and jasmonate metabolism, antioxidant enzymes, and enzymes of flavonoid and glucosinolate biosynthesis. DEX:IPT plants up-regulated phospholipase D and MAP-kinase 4. Cold stress response at the proteome level was similar in all genotypes under optimal light intensity, differing significantly under low light. The data characterized the decisive effect of light-CK cross-talk in the regulation of cold stress responses.", "claims": [{"id": "claim-method", "statement": "The quantitative differences were determined by Minora, employing precursor ion quantification followed by normalization and a background-based t test.", "kind": "methodological", "target": null, "evidence": [{"asset": "source:pmid:33613584", "locator": "sections[9] \"Proteomic Analysis\" paragraph 2", "quote": "The quantitative differences were determined by Minora, employing precursor ion quantification followed by normalization and a background-based t test."}], "state": "complete"}, {"id": "claim-data-access", "statement": "The datasets presented in this study can be found in online repositories. 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"note": "The specification of experimental conditions and the abbreviations of the respective experimental variants.", "structure": {"pmcid": "PMC7889523", "section_index": 3, "section_title": "Experimental Setup", "row_count": 5, "column_count": 4}, "table": {"label": "TABLE 1", "caption": "The specification of experimental conditions and the abbreviations of the respective experimental variants.", "rows": [["Abbreviation", "Conditions", "Photosynthetic photon flux density (μmol m–2 s–1)", "Temperature (°C)"], ["Control", "Control conditions", "150", "20"], ["C-NL", "Cold at normal light intensity", "150", "5"], ["C-LL", "Cold at low light intensity", "20", "5"], ["C-D", "Cold at dark", "0", "5"]], "row_count": 5, "column_count": 4, "numeric_cells": 9, "header_rows": 1, "locator": "section[3]/table-wrap[1]#T1"}}, {"id": "asset:table:pmid:33613584:2", "role": "table", "format": "jats-table", "media_type": "application/vnd.jats.table+json", "uri": null, "sha256": "sha256:6d1699a2e9037514234bace6f52bd9e22377fa36209b9c1f71488d86a48a9ba5", "bytes": 1995, "access": "open", "state": "verified", "reader": "read_table", "reader_status": "available", "identifier": "section[13]/table-wrap[1]#T2", "version": null, "note": "Photosynthetic parameters.", "structure": {"pmcid": "PMC7889523", "section_index": 13, "section_title": "Distinct Effect of Dark on Photosynthetic Parameters in Comparison With Light at a Wide Range of Intensities", "row_count": 18, "column_count": 13}, "table": {"label": "TABLE 2", "caption": "Photosynthetic parameters.", "rows": [["", "DEX", "DMSO"], ["", "", ""], ["", "WT", "DEX:IPT", "DEX:CKX", "WT", "DEX:IPT", "DEX:CKX"], ["Fv/Fm"], ["Control", "0.850 ± 0.001", "a", "0.847 ± 0.005", "ab", "0.838 ± 0.004", "ab", "0.846 ± 0.005", "A", "0.849 ± 0.004", "A", "0.847 ± 0.005", "A∗"], ["C-NL", "0.837 ± 0.005", "bc", "0.823 ± 0.009", "d", "0.828 ± 0.005", "cd", "0.839 ± 0.007", "A", "0.821 ± 0.015", "B", "0.822 ± 0.008", "B"], ["C-LL", "0.848 ± 0.004", "ab", "0.845 ± 0.005", "ab", "0.842 ± 0.008", "ab", "0.853 ± 0.005", "A", "0.840 ± 0.007", "A", "0.847 ± 0.005", "A"], ["C-D", "0.820 ± 0.009", "d", "0.809 ± 0.007", "e", "0.805 ± 0.008", "e", "0.814 ± 0.011", "B", "0.810 ± 0.011", "BC", "0.798 ± 0.015", "C"], ["QY_Lss"], ["Control", "0.521 ± 0.027", "bc", "0.599 ± 0.016", "a", "0.562 ± 0.022", "ab", "0.601 ± 0.009", "A∗", "0.563 ± 0.043", "ABC", "0.548 ± 0.056", "ABC"], ["C-NL", "0.604 ± 0.026", "a", "0.563 ± 0.031", "ab", "0.578 ± 0.040", "ab", "0.597 ± 0.025", "AB", "0.523 ± 0.061", "BC", "0.551 ± 0.054", "ABC"], ["C-LL", "0.607 ± 0.014", "a", "0.560 ± 0.026", "ab", "0.582 ± 0.008", "ab", "0.577 ± 0.036", "ABC", "0.582 ± 0.032", "AB", "0.591 ± 0.027", "AB"], ["C-D", "0.481 ± 0.043", "c", "0.474 ± 0.055", "c", "0.466 ± 0.039", "c", "0.499 ± 0.071", "C", "0.520 ± 0.053", "ABC", "0.504 ± 0.050", "C"], ["NPQ_Lss"], ["Control", "1.199 ± 0.188", "abc", "0.817 ± 0.070", "cde", "0.802 ± 0.117", "cde", "0.823 ± 0.099", "BC∗", "1.044 ± 0.186", "ABC∗", "1.113 ± 0.268", "AB∗"], ["C-NL", "0.701 ± 0.046", "e", "0.611 ± 0.124", "e", "0.649 ± 0.114", "e", "0.629 ± 0.055", "C∗", "0.769 ± 0.130", "BC∗", "0.691 ± 0.119", "BC"], ["C-LL", "0.785 ± 0.052", "de", "0.857 ± 0.154", "bcde", "0.750 ± 0.088", "e", "0.869 ± 0.136", "BC", "0.792 ± 0.193", "BC", "0.777 ± 0.087", "BC"], ["C-D", "1.391 ± 0.320", "a", "1.162 ± 0.345", "abcd", "1.210 ± 0.334", "ab", "1.308 ± 0.541", "A", "0.947 ± 0.310", "ABC", "1.028 ± 0.241", "ABC"]], "row_count": 18, "column_count": 13, "numeric_cells": 72, "header_rows": 3, "locator": "section[13]/table-wrap[1]#T2"}}], "gaps": ["asset:data:geo:PXD020480 not downloaded", "asset:data:geo:PXD020480 licence not read"]}, "analysis": {"state": "partial", "methods": [{"id": "method-1", "family": null, "specific": null, "label": "Background-based t test for quantitative proteomic differences", "dsl_operations": [], "missing_operations": [], "expressible": null, "parameters": {}, "data_shapes": 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The physical bench the paper used is not, so a physical validation cannot be run here."}, "data": {"tier": "R1", "reachable": true, "accessions": ["PXD020480"], "resolved_accessions": ["PXD020480"], "statements": ["The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found below: https://www.ebi.ac.uk/pride/archive/projects/PXD020480."], "basis": "The paper names PXD020480 in ProteomeXchange Consortium via the PRIDE partner repository and the accession resolves in the repository. 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Supplementary Table 1List of qPCR primers.Click here for additional data file."], "order_basis": "paper_text_order:6130", "id": "assay:1"}]}