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pmid:34843522

H19- and hsa-miR-338-3p-mediated NRP1 expression is an independent predictor of poor prognosis in glioblastoma.

Yong Liu · Yuelin Liu · Yong Gao · Lei Wang · Hengliang Shi · Chengmin Xuan

PloS one · 2021 doi:10.1371/journal.pone.0260103

Paper

complete

Experiment

complete

Data

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Analysis

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Execution

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Record details sci_version · id · kind · revision · content_hash · schema · created_at · updated_at · generator
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pmid:34843522
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title
H19- and hsa-miR-338-3p-mediated NRP1 expression is an independent predictor of poor prognosis in glioblastoma.
doi
10.1371/journal.pone.0260103
pmid
34843522
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[0]
Yong Liu
[1]
Yuelin Liu
[2]
Yong Gao
[3]
Lei Wang
[4]
Hengliang Shi
[5]
Chengmin Xuan
journal
PloS one
year
2021
abstract
Glioblastoma multiforme (GBM) is the most common and also the most invasive brain cancer. GBM progression is rapid and its prognosis is poor. Therefore, finding molecular targets in GBM is a critical goal that could also play important roles in clinical diagnostics and treatments to improve patient prognosis. We jointly analyzed the GSE103227, GSE103229, and TCGA databases for differentially expressed RNA species, obtaining 52 long non-coding RNAs (lncRNAs), 31 microRNAs (miRNAs), and 186 mRNAs, which were used to build a competing endogenous RNA network. Kaplan-Meier and receiver operating characteristic (ROC) analyses revealed five survival-related lncRNAs: H19, LINC01574, LINC01614, RNF144A-AS1, and OSMR-AS1. With multiple optimization mRNAs, we found the H19-hsa-miR-338-3P-NRP1 regulatory pathway. Additionally, we noted high NRP1 expression in GBM patients, and Kaplan-Meier and ROC analyses showed that NRP1 expression was associated with GBM prognosis. Cox analysis indicated that NRP1 is an independent prognostic factor in GBM patients. In conclusion, H19 and hsa-miR-338-3P regulate NRP1 expression, and this pathway plays an important role in GBM.
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Univariate and multivariate Cox analyses were performed using R software, with P<0.05 considered statistically significant.
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Univariate and multivariate Cox analyses were performed using R software, with P<0.05 considered statistically significant.
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The authors confirm that all data underlying the findings are fully available without restriction. All relevant data are within the paper and supporting information.
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Cox analysis indicated that NRP1 is an independent prognostic factor in GBM patients.
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Cox analysis indicated that NRP1 is an independent prognostic factor in GBM patients.
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Cox analysis indicated that NRP1 is an independent prognostic factor in GBM patients.
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extraction_review
reader object · 5 fields
model
MiniMax-M3.1-Flash
provider
minimax
provider_family
minimax
read_at
2026-11-01T17:09:23Z
independence
single_reader
evidence_check object · 2 fields
method
verbatim
availability
verbatim
calls
5
usage object · 3 fields
prompt_tokens
8741
completion_tokens
2083
cached_tokens
256
stages array · 1 item
[0] object · 4 fields
id
extraction
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complete
reader
MiniMax-M3.1-Flash
provider
minimax
gaps array · 3 items
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review.independent_reader
[1]
review.machine_critique
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review.human_critique
execution object · 5 fields
state
absent
status
not_run
mode
null
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gaps array · 1 item
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execution.not_run
provenance object · 7 fields
entities array · 3 items
[0] object · 3 fields
id
pmid:34843522
type
paper
label
pmid:34843522
[1] object · 3 fields
id
source:pmid:34843522
type
manuscript
label
PMID 34843522 full text
[2] object · 3 fields
id
data:geo:GSE103227
type
dataset
label
GEO GSE103227
activities array · 3 items
[0] object · 4 fields
id
activity-reading-sci-2026-11-01
type
classification
used array · 3 items
[0] object · 3 fields
id
pmid:34843522
type
paper
label
pmid:34843522
[1] object · 3 fields
id
source:pmid:34843522
type
manuscript
label
PMID 34843522 full text
[2] object · 3 fields
id
data:geo:GSE103227
type
dataset
label
GEO GSE103227
agent
agent:corpus-assay-engine
[1] object · 4 fields
id
activity-read-34843522
type
extraction
used array · 1 item
[0]
source:pmid:34843522
agent
agent:minimax-reader
[2] object · 4 fields
id
activity-resolve-GSE103227
type
accession_resolution
used array · 1 item
[0]
data:geo:GSE103227
agent
agent:corpus-assay-engine
agents array · 2 items
[0] object · 3 fields
id
agent:corpus-assay-engine
type
software
label
Corpus assay engine
[1] object · 3 fields
id
agent:minimax-reader
type
software
label
MiniMax literature reader
source_run_id
reading-sci-2026-11-01
dsl_catalogue_fingerprint
343fb30756ba6ec3
capability_table_fingerprint
2cb3e42f047d2ecf
snapshot_id
ba34b49490d9bfaf
lineage object · 4 fields
parent_id
pmid:34843522
parent_hash
sha256:3ea91dbe5e79c7e71f9a6fbd410c3e72760e35f3fc9c584d2d970aeba0921597
fork_of
null
gaps array · 11 items
[0]
asset:data:geo:GSE103227 licence not read
[1]
asset:data:geo:GSE103227 not downloaded
[2]
asset:data:geo:GSE103229 licence not read
[3]
asset:data:geo:GSE103229 not downloaded
[4]
asset:data:geo:GSE16011 licence not read
[5]
asset:data:geo:GSE16011 not downloaded
[6]
execution.not_run
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method.reader_named_unmapped
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review.human_critique
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review.independent_reader
[10]
review.machine_critique
assays array · 1 item
[0] object · 11 fields
role
analysis
definition_id
survival_analysis
definition_version
f2132e96ae6c7a4e
required_operations array · 1 item
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survival_km
support_state
supported
source_hashes object · 1 field
dsl_catalogue
f2132e96ae6c7a4e
evidence array · 1 item
[0]
Kaplan-Meier
order_basis
analysis_only
id
assay:1
Complete file
{"sci_version": "1.2", "schema": "https://corpus.bntrg.co.uk/sci/1.0/sci.schema.json", "id": "pmid:34843522", "kind": "science-record", "revision": 4, "content_hash": "sha256:3780b699b3c6600fc8fdf538ab5bea061220838f4f6fd901c36a8b038fe29279", "created_at": "2026-11-01T17:36:32Z", "updated_at": "2026-11-01T22:05:15Z", "generator": {"name": "corpus-assay-engine", "run_id": "reading-sci-2026-11-01"}, "paper": {"state": "complete", "title": "H19- and hsa-miR-338-3p-mediated NRP1 expression is an independent predictor of poor prognosis in glioblastoma.", "doi": "10.1371/journal.pone.0260103", "pmid": "34843522", "authors": ["Yong Liu", "Yuelin Liu", "Yong Gao", "Lei Wang", "Hengliang Shi", "Chengmin Xuan"], "journal": "PloS one", "year": 2021, "abstract": "Glioblastoma multiforme (GBM) is the most common and also the most invasive brain cancer. GBM progression is rapid and its prognosis is poor. Therefore, finding molecular targets in GBM is a critical goal that could also play important roles in clinical diagnostics and treatments to improve patient prognosis. We jointly analyzed the GSE103227, GSE103229, and TCGA databases for differentially expressed RNA species, obtaining 52 long non-coding RNAs (lncRNAs), 31 microRNAs (miRNAs), and 186 mRNAs, which were used to build a competing endogenous RNA network. Kaplan-Meier and receiver operating characteristic (ROC) analyses revealed five survival-related lncRNAs: H19, LINC01574, LINC01614, RNF144A-AS1, and OSMR-AS1. With multiple optimization mRNAs, we found the H19-hsa-miR-338-3P-NRP1 regulatory pathway. Additionally, we noted high NRP1 expression in GBM patients, and Kaplan-Meier and ROC analyses showed that NRP1 expression was associated with GBM prognosis. Cox analysis indicated that NRP1 is an independent prognostic factor in GBM patients. In conclusion, H19 and hsa-miR-338-3P regulate NRP1 expression, and this pathway plays an important role in GBM.", "claims": [{"id": "claim-method", "statement": "Univariate and multivariate Cox analyses were performed using R software, with P<0.05 considered statistically significant.", "kind": "methodological", "target": null, "evidence": [{"asset": "source:pmid:34843522", "locator": "sections[6] \"Statistical analysis\" paragraph 2", "quote": "Univariate and multivariate Cox analyses were performed using R software, with P<0.05 considered statistically significant."}], "state": "complete"}, {"id": "claim-data-access", "statement": "The authors confirm that all data underlying the findings are fully available without restriction. 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