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pmid:35982735

Circular RNA hsa_circ_0002360 Promotes Proliferation and Invasion and Inhibits Oxidative Stress in Gastric Cancer by Sponging miR-629-3p and Regulating the PDLIM4 Expression.

Zhengyuan Yu · Jing Lan · Wei Li · Li Jin · Feng Qi · Chen Yu · Hao Zhu

Oxidative medicine and cellular longevity · 2022 doi:10.1155/2022/2775433

Paper

complete

Experiment

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Data

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Analysis

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title
Circular RNA hsa_circ_0002360 Promotes Proliferation and Invasion and Inhibits Oxidative Stress in Gastric Cancer by Sponging miR-629-3p and Regulating the PDLIM4 Expression.
doi
10.1155/2022/2775433
pmid
35982735
authors array · 7 items
[0]
Zhengyuan Yu
[1]
Jing Lan
[2]
Wei Li
[3]
Li Jin
[4]
Feng Qi
[5]
Chen Yu
[6]
Hao Zhu
journal
Oxidative medicine and cellular longevity
year
2022
abstract
Many studies have found that circRNA hsa_0002360 (circ0002360) plays an important role in cancer onset and progression. However, its role in gastric cancer (GC) remains uncertain. Circ0002360 was found to be upregulated in GC cells using QRT-PCR. Furthermore, miR-629-3p, a target miRNA of circ0002360, was the most suppressed miRNA following circ0002360 overexpression. RNA immunoprecipitation (RIP), dual-luciferase reporter analyses, clone formation, transwell, DCFH-DA, and ELISA assays demonstrated that circ0002360-targeted miR-629-3p promotes cell proliferation and migration while inhibiting oxidative stress. GC-related mRNA microarrays from the GEO and TCGA databases, including GSE103236, GSE79973, GSE33429, GSE22804, GSE84437, and TCGA-STAD datasets, were used to find hub biomarkers between normal and gastric cancer samples. WGCNA and uni-Cox analysis were used to identify 27 survival-related risk genes, which were then used to build a risk model for prognosis prediction. Following that, all patients from the GSE84437 and TCGA-STAD datasets with 27 survival-related genes and enough data on survival status and time were randomly assigned to train (n = 433) and test (n = 375) cohorts. Furthermore, ROC and Kaplan-Meier (KM) analyses were used to validate the risk model for both cohorts. randomForest analysis indicated that PDLIM4 was the target gene of miR-629-3p, whose level was increased by circ0002360 but reversed by miR-629-3p mimics. Finally, this study confirmed that circ0002360 sponged miR-629-3p and then upregulated PDLIM4 expression. As a result, circ0002360 may be a useful marker for predicting GC prognosis and an anti-GC treatment target.
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Weighted correlation network analysis (WGCNA) was also used in this study to create a weighted gene coexpression correlation network.
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Weighted correlation network analysis (WGCNA) was also used in this study to create a weighted gene coexpression correlation network.
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Finally, this study confirmed that circ0002360 sponged miR-629-3p and then upregulated PDLIM4 expression.
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Finally, this study confirmed that circ0002360 sponged miR-629-3p and then upregulated PDLIM4 expression.
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Finally, this study confirmed that circ0002360 sponged miR-629-3p and then upregulated PDLIM4 expression.
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483
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group_sizes_basis
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6947
taxon
Homo sapiens
title
Molecular subtypes in gastric cancer.
resolution_checked_at
2026-11-01T15:39:55Z
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identifier_resolution_only_no_download_no_licence_read
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[3]
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[4]
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[5]
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[6]
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[7]
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[8]
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[9]
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student_t
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two_or_more_groups_continuous
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survival_analysis
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survival_km
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time_to_event_with_censoring
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method-7
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null
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evidence object · 3 fields
score
1
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verbatim
quote
Weighted correlation network analysis (WGCNA) was also used in this study to create a weighted gene coexpression correlation network.
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gwas
candidate
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readiness object · 8 fields
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tier
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student_t
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The paper names the method it used and the corpus's method extractor maps it onto the DSL catalogue: student_t_test.
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tier
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The computational analysis is owned. The physical bench the paper used is not, so a physical validation cannot be run here.
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[0]
GSE103236
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GSE33429
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GSE22804
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GSE84437
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GSE103236
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GSE84437
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[0]
Data will be available upon reasonable request.
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student_t
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data:geo:GSE103236
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minimax
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minimax
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2026-11-01T18:00:26Z
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extraction
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es, clone formation, transwell, DCFH-DA, and ELISA assays demonstrated that circ0002360-targete
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t at FDR<0.05. 2.14. Cell Culture as well as Transfection In this study, human GC cells (NCI-N87, SNU-
[1]
ls (RiboBio, Guangzhou, China) plasmids were transfected into cells by the use of Lipofectamine 2000
[2]
, MA, USA). qRT-PCR was conducted to measure transfection efficiency. 2.19. Statistical Analysis All r
[3]
IM4 overexpression (OE circ_0002360/PDLIM4), shRNA against PDLIM4 (sh PDLIM4), miR-629-3p mimic
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Complete file
{"sci_version": "1.2", "schema": "https://corpus.bntrg.co.uk/sci/1.0/sci.schema.json", "id": "pmid:35982735", "kind": "science-record", "revision": 4, "content_hash": "sha256:5906f7550cdc1fac916f56f559b41708ba349ac9af9f10c110556ae87e244786", "created_at": "2026-11-01T18:15:06Z", "updated_at": "2026-11-01T22:07:17Z", "generator": {"name": "corpus-assay-engine", "run_id": "reading-sci-2026-11-01"}, "paper": {"state": "complete", "title": "Circular RNA hsa_circ_0002360 Promotes Proliferation and Invasion and Inhibits Oxidative Stress in Gastric Cancer by Sponging miR-629-3p and Regulating the PDLIM4 Expression.", "doi": "10.1155/2022/2775433", "pmid": "35982735", "authors": ["Zhengyuan Yu", "Jing Lan", "Wei Li", "Li Jin", "Feng Qi", "Chen Yu", "Hao Zhu"], "journal": "Oxidative medicine and cellular longevity", "year": 2022, "abstract": "Many studies have found that circRNA hsa_0002360 (circ0002360) plays an important role in cancer onset and progression. However, its role in gastric cancer (GC) remains uncertain. Circ0002360 was found to be upregulated in GC cells using QRT-PCR. Furthermore, miR-629-3p, a target miRNA of circ0002360, was the most suppressed miRNA following circ0002360 overexpression. RNA immunoprecipitation (RIP), dual-luciferase reporter analyses, clone formation, transwell, DCFH-DA, and ELISA assays demonstrated that circ0002360-targeted miR-629-3p promotes cell proliferation and migration while inhibiting oxidative stress. GC-related mRNA microarrays from the GEO and TCGA databases, including GSE103236, GSE79973, GSE33429, GSE22804, GSE84437, and TCGA-STAD datasets, were used to find hub biomarkers between normal and gastric cancer samples. WGCNA and uni-Cox analysis were used to identify 27 survival-related risk genes, which were then used to build a risk model for prognosis prediction. Following that, all patients from the GSE84437 and TCGA-STAD datasets with 27 survival-related genes and enough data on survival status and time were randomly assigned to train (n = 433) and test (n = 375) cohorts. Furthermore, ROC and Kaplan-Meier (KM) analyses were used to validate the risk model for both cohorts. randomForest analysis indicated that PDLIM4 was the target gene of miR-629-3p, whose level was increased by circ0002360 but reversed by miR-629-3p mimics. Finally, this study confirmed that circ0002360 sponged miR-629-3p and then upregulated PDLIM4 expression. As a result, circ0002360 may be a useful marker for predicting GC prognosis and an anti-GC treatment target.", "claims": [{"id": "claim-method", "statement": "Weighted correlation network analysis (WGCNA) was also used in this study to create a weighted gene coexpression correlation network.", "kind": "methodological", "target": null, "evidence": [{"asset": "source:pmid:35982735", "locator": "sections[6] \"2.4. 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