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pmid:36225590

Comprehensive analysis for cellular senescence-related immunogenic characteristics and immunotherapy prediction of acute myeloid leukemia.

Yan Mao · Jinwen Xu · Xuejiao Xu · Jiayun Qiu · Zhengyun Hu · Feng Jiang · Guoping Zhou

Frontiers in pharmacology · 2022 doi:10.3389/fphar.2022.987398

Paper

complete

Experiment

complete

Data

partial

Analysis

complete

Execution

absent

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title
Comprehensive analysis for cellular senescence-related immunogenic characteristics and immunotherapy prediction of acute myeloid leukemia.
doi
10.3389/fphar.2022.987398
pmid
36225590
authors array · 7 items
[0]
Yan Mao
[1]
Jinwen Xu
[2]
Xuejiao Xu
[3]
Jiayun Qiu
[4]
Zhengyun Hu
[5]
Feng Jiang
[6]
Guoping Zhou
journal
Frontiers in pharmacology
year
2022
abstract
In malignancies, cellular senescence is critical for carcinogenesis, development, and immunological regulation. Patients with acute myeloid leukemia (AML) have not investigated a reliable cellular senescence-associated profile and its significance in outcomes and therapeutic response. Cellular senescence-related genes were acquired from the CellAge database, while AML data were obtained from the GEO and TCGA databases. The TCGA-AML group served as a training set to construct a prognostic risk score signature, while the GSE71014 set was used as a testing set to validate the accuracy of the signature. Through exploring the expression profiles of cellular senescence-related genes (SRGs) in AML patients, we used Lasso and Cox regression analysis to establish the SRG-based signature (SRGS), which was validated as an independent prognostic predictor for AML patients via clinical correlation. Survival analysis showed that AML patients in the low-risk score group had a longer survival time. Tumor immune infiltration and functional enrichment analysis demonstrated that AML patients with low-risk scores had higher immune infiltration and active immune-related pathways. Meanwhile, drug sensitivity analysis and the TIDE algorithm showed that the low-risk score group was more susceptible to chemotherapy and immunotherapy. Cell line analysis in vitro further confirmed that the SRGs in the proposed signature played roles in the susceptibility to cytarabine and YM155. Our results indicated that SRGS, which regulates the immunological microenvironment, is a reliable predictor of the clinical outcome and immunotherapeutic response in AML.
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Univariate Cox analysis was carried out to identify SRGs with prognostic values. The LASSO Cox regression analysis was carried out to construct the model for predicting the survival of AML patients.
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Univariate Cox analysis was carried out to identify SRGs with prognostic values. The LASSO Cox regression analysis was carried out to construct the model for predicting the survival of AML patients.
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The eight-gene cellular senescence-related gene signature was validated as an independent prognostic predictor of survival and as a predictor of immunotherapeutic and chemotherapy response in acute myeloid leukemia.
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Our results indicated that SRGS, which regulates the immunological microenvironment, is a reliable predictor of the clinical outcome and immunotherapeutic response in AML.
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The eight-gene cellular senescence-related gene signature was validated as an independent prognostic predictor of survival and as a predictor of immunotherapeutic and chemotherapy response in acute myeloid leukemia.
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title
An mRNA Expression Signature for Prognostication in De Novo Acute Myeloid Leukemia Patients with Normal Karyotype
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