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pmid:36980858
SERPINF1 Mediates Tumor Progression and Stemness in Glioma.
Lairong Song · Xulei Huo · Xiaojie Li · Xiaoying Xu · Yi Zheng · Da Li · Junting Zhang · Ke Wang · Liang Wang · Zhen Wu
Genes · 2023 doi:10.3390/genes14030580
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Experiment
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Data
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Analysis
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Execution
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Complete file
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In the present study, we analyzed the prognostic value of SERPINF1 in three independent glioma datasets. Next, we explored the molecular functions and transcriptional regulation of SERPINF1 at the single-cell level. Moreover, in vitro experiments were conducted to evaluate the roles of SERPINF1 in the proliferation, invasion, migration, and stemness of glioma cells. Our results showed that a higher expression of SERPINF1 correlated with a poor overall survival rate in glioma patients (hazard ratio: 4.061 in TCGA, 2.017 in CGGA, and 1.675 in GSE16011, p < 0.001). Besides, SERPINF1 knockdown could suppress the proliferation, invasion, and migration of glioma cells in vitro. In addition, SERPINF1 expression was significantly upregulated in glioma stem cells (GSCs) compared to parental glioma cells. Knocking down SERPINF1 impaired the sphere formation of GSC-A172 and GSC-LN18. 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GSCs were cultured in DMEM/F-12 supplemented with 1 × B27 (Invitro"], "order_basis": "paper_text_order:3162", "id": "assay:5"}, {"role": "data_generation", "definition_id": "western_blot", "definition_version": "99e1195c7d6f", "definition_digest": null, "required_operations": [], "support_state": "partial", "source_hashes": {"assay_lexicon": "99e1195c7d6f"}, "confidence": 0.93, "evidence": ["ncy of SERPINF1 in A172 and LN18 verified by Western blot; Figure S2: Cellular morphological images of"], "order_basis": "paper_text_order:5139", "id": "assay:6"}, {"role": "data_generation", "definition_id": "chip_seq", "definition_version": "99e1195c7d6f", "definition_digest": null, "required_operations": [], "support_state": "partial", "source_hashes": {"assay_lexicon": "99e1195c7d6f"}, "confidence": 0.93, "evidence": ["nd LN18 after SERPINF1 knockdown; Figure S3: ChIP-seq data of the TFs in Cistrome Data Browser; Ta"], "order_basis": "paper_text_order:5248", "id": "assay:7"}, {"role": "analysis", "definition_id": "survival_analysis", "definition_version": "f2132e96ae6c7a4e", "definition_digest": null, "required_operations": ["logrank_test"], "support_state": "supported", "source_hashes": {"dsl_catalogue": "f2132e96ae6c7a4e"}, "confidence": 0.8, "evidence": ["log-rank"], "order_basis": "consumes_earlier_output", "id": "assay:8"}]}