Transcriptomic data of imbibed wheat (Triticum aestivum L.) seeds developed at different temperatures.

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Seed dormancy is an important trait that inhibits seed germination under optimal conditions and therefore has important implication in preventing the incidence of preharvest sprouting, which refers to the germination of seeds on the mother plant prior to harvest, in wheat. Since preharvest sprouting, which causes a significant reduction in seed yield and quality in wheat, is closely associated with low level of seed dormancy manifested in modern wheat cultivars, it is important to develop wheat cultivars with optimal level of dormancy to enhance wheat yield and quality. Thus, elucidation of the molecular mechanisms that regulate seed dormancy is critical for the development of preharvest sprouting resistant wheat cultivars. The data we are presenting here were generated from total RNA samples extracted from imbibed seeds of a dormant wheat (Triticum aestivum L.) genotype that were developed at different temperatures using the Affymetrix GeneChip Wheat Genome Array. The raw and normalized formats of these data are deposited in the NCBI's gene expression data repository, Gene Expression Ominbus (GEO) with accession number GSE153527.", "claims": [{"id": "claim-method", "statement": "Probesets that exhibited differential expression between embryos of seeds developed at the different temperature regimes were identified using FlexArray software [6] via analysis of variance.", "kind": "methodological", "target": null, "evidence": [{"asset": "source:pmid:37732293", "locator": "sections[9] \"Data analysis\" paragraph 2", "quote": "Probesets that exhibited differential expression between embryos of seeds developed at the different temperature regimes were identified using FlexArray software [6] via analysis of variance."}], "state": "complete"}, {"id": "claim-data-access", "statement": "Expression data from imbibed wheat seeds developed at different temperatures (Original data) (Gene Expression Ominbus (GEO)).", "kind": "methodological", "target": null, "evidence": [{"asset": "source:pmid:37732293", "locator": "sections[14] \"Data Availability\" paragraph 2", "quote": "Expression data from imbibed wheat seeds developed at different temperatures (Original data) (Gene Expression Ominbus (GEO))."}], "state": "complete"}, {"id": "claim-target-result", "statement": "The present data profile a large scale transcriptome changes associated with variations in seed dormancy level induced by seed development temperature in hexaploid wheat.", "kind": "qualitative", "target": null, "evidence": [{"asset": "source:pmid:37732293", "locator": "sections[0] \"Abstract\" paragraph 1", "quote": "The present data profile a large scale transcriptome changes associated with variations in seed dormancy level induced by seed development temperature in hexaploid wheat."}], "state": "complete"}], "gaps": []}, "experiment": {"state": "complete", "objective": "The present data profile a large scale transcriptome changes associated with variations in seed dormancy level induced by seed development temperature in hexaploid wheat.", "steps": [{"id": "read_published_estimate", "order": 1, "name": "Read the published estimate from the source", "kind": "other", "state": "complete", "blocked_on": null, "description": "The claim, method and evidence span published with the source article.", "duration_hours": null, "parameters": {}, "inputs": ["source:pmid:37732293"], "outputs": ["the published estimate and its evidence"], "instruments": [], "reagents": []}, {"id": "obtain_source_data", "order": 2, "name": "Obtain the source data from the named repository", "kind": "data-preparation", "state": "complete", "blocked_on": null, "description": "The GEO series accession resolves and its sample accessions are listed. 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