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pmid:39588301

CXCR6 expression predicts prognosis and immunotherapeutic benefit in muscle-invasive bladder cancer.

Xiaolin Lu · Li-Ping Ge · Zhaopei Liu · Yu Zhu · Dingwei Ye · Yuan Chang

Frontiers in oncology · 2024 doi:10.3389/fonc.2024.1498579

Paper

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Experiment

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Data

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title
CXCR6 expression predicts prognosis and immunotherapeutic benefit in muscle-invasive bladder cancer.
doi
10.3389/fonc.2024.1498579
pmid
39588301
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Xiaolin Lu
[1]
Li-Ping Ge
[2]
Zhaopei Liu
[3]
Yu Zhu
[4]
Dingwei Ye
[5]
Yuan Chang
journal
Frontiers in oncology
year
2024
abstract
Background: Increasing evidence suggests that the CXC chemokine receptor 6 (CXCR6) is involved in tumor progression and the regulation of tumor immunity. However, its role in muscle-invasive bladder cancer (MIBC) remains largely unexplored. Methods: Data from 391 MIBC patients in the TCGA, 212 patients from GEO, 131 patients from our center, 195 patients in the IMvigor210 cohort, and single-cell RNA sequencing (scRNA-seq) data from 9 bladder cancer patients (GSE222315) were analyzed. Additionally, data from the GEPIA 2, TISCH2, TIMER2.0, and UALCAN platforms were utilized to investigate the prognostic and immunotherapeutic significance of CXCR6 in MIBC. Results: We observed that CXCR6 expression was significantly reduced in bladder cancer tumors and correlated with tumor stage and grade. Low CXCR6 expression was associated with poor recurrence-free survival (RFS) and overall survival (OS) in the TCGA cohort, a finding validated in both the meta-GEO dataset and our center's cohort. Multivariate analysis confirmed that low CXCR6 expression was an independent predictor of poor OS and RFS. A nomogram incorporating CXCR6 expression and other independent prognostic factors was developed to accurately predict 3- and 5-year OS. Gene set enrichment analysis indicated that immune activation-related pathways were significantly enriched in tumors with high CXCR6 expression. CIBERSORT analysis revealed that CXCR6 expression was positively correlated with CD8+ T cells, CD4+ T cells, activated NK cells, M1 macrophages, and activated dendritic cells in TCGA, findings further validated by TIMER2.0. scRNA-seq data showed that CXCR6 was predominantly expressed in T and NK cells and facilitated T/NK-myeloid interaction via the CXCR6-CXCL16 axis. Importantly, CXCL16+ macrophages and dendritic cells recruited CXCR6+ T and NK cells, which exhibited enhanced cytotoxicity, thereby amplifying anti-tumor immunity. Clinically, in the IMvigor210 immunotherapy cohort, higher CXCR6 expression was associated with improved anti-PD-L1 therapeutic outcomes. Conclusion: Our findings highlight CXCR6 as a critical biomarker for predicting prognosis and immunotherapeutic response in MIBC.
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sample_count
142
group_sizes
null
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null
platform
6947
taxon
Homo sapiens
title
Identification of subsets of urothelial carcinoma
resolution_checked_at
2026-11-01T15:39:54Z
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identifier_resolution_only_no_download_no_licence_read
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Survival curves were analyzed using the Kaplan-Meier method and compared with log-rank tests.
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candidate
Automated Assays Laravel application and simulated adapters
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tier
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basis
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data object · 6 fields
tier
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[0]
GSE13507
[1]
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[2]
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[3]
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[0]
GSE13507
[1]
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[0]
The data presented in the study can be found in online repositories. The names of the repositories and accession numbers can be found in the article/ Supplementary Material . Further inquiries can be directed to the corresponding author.
basis
The paper names GSE13507, GSE31684, GSE48075, GSE222315 in Gene Expression Omnibus (GEO) database and the accession resolves in the repository. No dataset was downloaded and no licence was read.
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minimax
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minimax
read_at
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source:pmid:39588301
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data:geo:GSE13507
type
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GEO GSE13507
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used array · 1 item
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[0]
, 195 patients in the IMvigor210 cohort, and single-cell RNA sequencing (scRNA-seq) data from 9 bladder cancer patie
[1]
r210 cohort, and single-cell RNA sequencing (scRNA-seq) data from 9 bladder cancer patients (GSE222
[2]
CGA, findings further validated by TIMER2.0. scRNA-seq data showed that CXCR6 was predominantly exp
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ts in the IMvigor210 cohort, and single-cell RNA sequencing (scRNA-seq) data from 9 bladder cancer patie
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als and methods Patients in FUSCC cohort and immunohistochemistry This study included 131 MIBC patients (pT2-T
[1]
arrays were constructed, and single-staining IHC was performed as previously described (26).
[2]
performed as previously described (26). The IHC score for CXCR6 was calculated by multiplyin
[3]
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endently reviewed the slides, and all tissue microarray samples were stained concurrently. CXCR6 exp
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Complete file
{"sci_version": "1.2", "schema": "https://corpus.bntrg.co.uk/sci/1.0/sci.schema.json", "id": "pmid:39588301", "kind": "science-record", "revision": 2, "content_hash": "sha256:96086b25dc05a434250f6cf687803e57b121ac2a32e19ba52ba6765645b27ab7", "created_at": "2026-11-01T20:29:51Z", "updated_at": "2026-11-01T21:34:24Z", "generator": {"name": "corpus-assay-engine", "run_id": "reading-sci-2026-11-01"}, "paper": {"state": "complete", "title": "CXCR6 expression predicts prognosis and immunotherapeutic benefit in muscle-invasive bladder cancer.", "doi": "10.3389/fonc.2024.1498579", "pmid": "39588301", "authors": ["Xiaolin Lu", "Li-Ping Ge", "Zhaopei Liu", "Yu Zhu", "Dingwei Ye", "Yuan Chang"], "journal": "Frontiers in oncology", "year": 2024, "abstract": "Background: Increasing evidence suggests that the CXC chemokine receptor 6 (CXCR6) is involved in tumor progression and the regulation of tumor immunity. However, its role in muscle-invasive bladder cancer (MIBC) remains largely unexplored.\nMethods: Data from 391 MIBC patients in the TCGA, 212 patients from GEO, 131 patients from our center, 195 patients in the IMvigor210 cohort, and single-cell RNA sequencing (scRNA-seq) data from 9 bladder cancer patients (GSE222315) were analyzed. Additionally, data from the GEPIA 2, TISCH2, TIMER2.0, and UALCAN platforms were utilized to investigate the prognostic and immunotherapeutic significance of CXCR6 in MIBC.\nResults: We observed that CXCR6 expression was significantly reduced in bladder cancer tumors and correlated with tumor stage and grade. Low CXCR6 expression was associated with poor recurrence-free survival (RFS) and overall survival (OS) in the TCGA cohort, a finding validated in both the meta-GEO dataset and our center's cohort. Multivariate analysis confirmed that low CXCR6 expression was an independent predictor of poor OS and RFS. A nomogram incorporating CXCR6 expression and other independent prognostic factors was developed to accurately predict 3- and 5-year OS. Gene set enrichment analysis indicated that immune activation-related pathways were significantly enriched in tumors with high CXCR6 expression. CIBERSORT analysis revealed that CXCR6 expression was positively correlated with CD8+ T cells, CD4+ T cells, activated NK cells, M1 macrophages, and activated dendritic cells in TCGA, findings further validated by TIMER2.0. scRNA-seq data showed that CXCR6 was predominantly expressed in T and NK cells and facilitated T/NK-myeloid interaction via the CXCR6-CXCL16 axis. Importantly, CXCL16+ macrophages and dendritic cells recruited CXCR6+ T and NK cells, which exhibited enhanced cytotoxicity, thereby amplifying anti-tumor immunity. Clinically, in the IMvigor210 immunotherapy cohort, higher CXCR6 expression was associated with improved anti-PD-L1 therapeutic outcomes.\nConclusion: Our findings highlight CXCR6 as a critical biomarker for predicting prognosis and immunotherapeutic response in MIBC.", "claims": [{"id": "claim-method", "statement": "Survival curves were analyzed using the Kaplan-Meier method and compared with log-rank tests.", "kind": "methodological", "target": null, "evidence": [{"asset": "source:pmid:39588301", "locator": "sections[10] \"Statistical analyses\" paragraph 2", "quote": "Survival curves were analyzed using the Kaplan-Meier method and compared with log-rank tests."}], "state": "complete"}, {"id": "claim-data-access", "statement": "The data presented in the study can be found in online repositories. The names of the repositories and accession numbers can be found in the article/ Supplementary Material . 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