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pmid:40650922
Tsbrowse: an interactive browser for ancestral recombination graphs.
Savita Karthikeyan · Ben Jeffery · Duncan Mbuli-Robertson · Jerome Kelleher
Bioinformatics (Oxford, England) · 2025 doi:10.1093/bioinformatics/btaf393
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Experiment
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Data
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Analysis
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Complete file
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The ability to capture the evolutionary history of samples makes ARGs valuable in a wide range of applications in population and statistical genetics. ARG-based approaches are increasingly becoming a part of genetic data analysis pipelines due to breakthroughs enabling ARG inference at biobank-scale. However, there is a lack of visualization tools, which are crucial for validating inferences and generating hypotheses. We present tsbrowse, an open-source, web-based Python application for the interactive visualization of the fundamental building blocks of ARGs, i.e. nodes, edges and mutations. 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