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pmid:41358196

Identification of mono-ADP-ribose readers using well-defined photoaffinity-based probes.

Femke L A M van der Heijden · Suzanne A Weijers · Spyridoula Kondyli · Onno Bleijerveld · Michiel Vermeulen · Dmitri V Filippov

RSC chemical biology · 2025 doi:10.1039/d5cb00176e

Paper

complete

Experiment

complete

Data

partial

Analysis

partial

Execution

absent

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Identification of mono-ADP-ribose readers using well-defined photoaffinity-based probes.
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10.1039/d5cb00176e
pmid
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Femke L A M van der Heijden
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Suzanne A Weijers
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Spyridoula Kondyli
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Onno Bleijerveld
[4]
Michiel Vermeulen
[5]
Dmitri V Filippov
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RSC chemical biology
year
2025
abstract
Adenosine diphosphate ribosylation is a significant post-translational modification implicated in various cellular processes and diseases, yet identifying its mono-ADP-ribose readers has posed considerable challenges. Previous proteomic screenings have predominantly focused on poly-ADP-ribose, resulting in the oversight of mono-ADP-ribose readers due to undefined ADP-ribose structures with randomly placed photo-crosslinking moieties. This study introduces novel, well-defined mono-ADP-ribose photoaffinity-based probes featuring distinct diazirine and benzophenone photo-crosslinkers aimed at selectively identifying mono-ADP-ribose readers. Using human HeLa protein extracts, these probes were employed in an interactomics screening, successfully uncovering numerous known and putative mono-ADP-ribose readers, including MACROD1. This study highlights the potential of these novel probes as powerful tools for exploring the mono-ADP-ribose interactome, thereby enhancing the understanding of ADP-ribosylation signaling within cellular contexts. Proteomics data are available via ProteomeXchange with identifier PXD065574.
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Identification of Mono-ADP-Ribose Readers Using Well-Defined Photoaffinity-based Probes
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